RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 TRIM49BA6NDI0 452 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 OTOL1A6NHN0 477 aaPredicted RBP16.5■□□□□ 0.23
FOXA3-202ENST00000594297 OR6C75A6NL08 312 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 DCLK1O15075 740 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 CLIC2O15247 247 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 TGFB1I1O43294 461 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 FGF19O95750 216 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 EGFP01133 1207 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 CXCL8P10145 99 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 EPB41P11171 864 aaKnown RBP16.5■□□□□ 0.23
FOXA3-202ENST00000594297 HOXD13P35453 343 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 PSMC2P35998 433 aaKnown RBP16.5■□□□□ 0.23
FOXA3-202ENST00000594297 CREB5Q02930 508 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 IQCB1Q15051 598 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 CCDC40Q4G0X9 1142 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 ZCWPW2Q504Y3 356 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 SH3PXD2AQ5TCZ1 1133 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 TRIM68Q6AZZ1 485 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 FILIP1Q7Z7B0 1213 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 CREBRFQ8IUR6 639 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 XXYLT1Q8NBI6 393 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 TMEM174Q8WUU8 243 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 ANP32BQ92688 251 aaKnown RBP16.5■□□□□ 0.23
FOXA3-202ENST00000594297 MSTO1Q9BUK6 570 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 OXCT2Q9BYC2 517 aaPredicted RBP16.5■□□□□ 0.23
FOXA3-202ENST00000594297 TASP1Q9H6P5 420 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 IL21Q9HBE4 155 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 METTL14Q9HCE5 456 aaKnown RBP16.5■□□□□ 0.23
FOXA3-202ENST00000594297 NUP205Q92621 2012 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 AKAP13Q12802 2813 aa16.5■□□□□ 0.23
FOXA3-202ENST00000594297 ATG2BQ96BY7 2078 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 ATG13O75143 517 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 TPM3P06753 285 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 KRT13P13646 458 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 ATF6P18850 670 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 EEF1GP26641 437 aaKnown RBP16.49■□□□□ 0.23
FOXA3-202ENST00000594297 WEE1P30291 646 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 LRPAP1P30533 357 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 CYP2J2P51589 502 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 GUCY2FP51841 1108 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 GRSF1Q12849 480 aaKnown RBP eCLIP16.49■□□□□ 0.23
FOXA3-202ENST00000594297 ELF2Q15723 593 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 CEP135Q66GS9 1140 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 NAIF1Q69YI7 327 aaPredicted RBP16.49■□□□□ 0.23
FOXA3-202ENST00000594297 DHX40Q8IX18 779 aaKnown RBP16.49■□□□□ 0.23
FOXA3-202ENST00000594297 CAMKK1Q8N5S9 505 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 GATA6Q92908 595 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 RBSNQ9H1K0 784 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 EBF3Q9H4W6 596 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 FANCLQ9NW38 375 aa16.49■□□□□ 0.23
FOXA3-202ENST00000594297 THG1LQ9NWX6 298 aaKnown RBP16.49■□□□□ 0.23
FOXA3-202ENST00000594297 AGO2Q9UKV8 859 aaKnown RBP16.49■□□□□ 0.23
FOXA3-202ENST00000594297 BCLAF3A2AJT9 711 aaKnown RBP16.48■□□□□ 0.23
FOXA3-202ENST00000594297 TMEM8BA6NDV4 472 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 TRDMT1O14717 391 aaKnown RBP16.48■□□□□ 0.23
FOXA3-202ENST00000594297 PPEF2O14830 753 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 SLC16A3O15427 465 aaKnown RBP16.48■□□□□ 0.23
FOXA3-202ENST00000594297 PRKCSHP14314 528 aaPredicted RBP16.48■□□□□ 0.23
FOXA3-202ENST00000594297 CDR1P51861 262 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 PMS1P54277 932 aaKnown RBP16.48■□□□□ 0.23
FOXA3-202ENST00000594297 RUNX3Q13761 415 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 FILIP1LQ4L180 1135 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 OVOS1Q6IE37 1185 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 DSTYKQ6XUX3 929 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 ITIH5Q86UX2 942 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 GAS2L3Q86XJ1 694 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 GPD1LQ8N335 351 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 RIN3Q8TB24 985 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 KIF12Q96FN5 646 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 GCNAQ96QF7 691 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 SEPT5Q99719 369 aaPredicted RBP16.48■□□□□ 0.23
FOXA3-202ENST00000594297 DUSP9Q99956 384 aaKnown RBP16.48■□□□□ 0.23
FOXA3-202ENST00000594297 FAM83CQ9BQN1 747 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 GKN1Q9NS71 199 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 HSPBP1Q9NZL4 362 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 CCL26Q9Y258 94 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 STYXL1Q9Y6J8 313 aa16.48■□□□□ 0.23
FOXA3-202ENST00000594297 ZNF233A6NK53 670 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 SRRM3A6NNA2 597 aaPredicted RBP16.47■□□□□ 0.23
FOXA3-202ENST00000594297 ANKRD63C9JTQ0 380 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 MAPK13O15264 365 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 SERPINC1P01008 464 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 ARSAP15289 507 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 CDC25CP30307 473 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 MTIF2P46199 727 aaKnown RBP16.47■□□□□ 0.23
FOXA3-202ENST00000594297 PPP2R3AQ06190 1150 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 MCL1Q07820 350 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 DAB2IPQ5VWQ8 1189 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 CMTM8Q8IZV2 173 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 OR10T2Q8NGX3 314 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 RPLP0P6Q8NHW5 317 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 ZCCHC14Q8WYQ9 949 aaKnown RBP16.47■□□□□ 0.23
FOXA3-202ENST00000594297 SCNM1Q9BWG6 230 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 SLC46A2Q9BY10 475 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 HAPLN2Q9GZV7 340 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 PCIF1Q9H4Z3 704 aa16.47■□□□□ 0.23
FOXA3-202ENST00000594297 FBRSL1Q9HCM7 1045 aaKnown RBP16.47■□□□□ 0.23
FOXA3-202ENST00000594297 ARMCX3Q9UH62 379 aaPredicted RBP16.47■□□□□ 0.23
FOXA3-202ENST00000594297 ZNF638Q14966 1978 aaKnown RBP16.46■□□□□ 0.23
FOXA3-202ENST00000594297 A0A0B4J269 797 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms