RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 PCDHB8Q9UN66 801 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 ALG6Q9Y672 507 aa13.93□□□□□ -0.18
VRK3-205ENST00000593919 MYBPHLA2RUH7 354 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 E5RJQ4 531 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 PIK3R2O00459 728 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 TADA2AO75478 443 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 ALDH2P05091 517 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 SETSIPP0DME0 302 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 RGS7P49802 495 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 GSCP56915 257 aaPredicted RBP13.92□□□□□ -0.18
VRK3-205ENST00000593919 WDR5P61964 334 aaKnown RBP13.92□□□□□ -0.18
VRK3-205ENST00000593919 RPL7AP62424 266 aaKnown RBP13.92□□□□□ -0.18
VRK3-205ENST00000593919 YWHAHQ04917 246 aaPredicted RBP13.92□□□□□ -0.18
VRK3-205ENST00000593919 CPNE8Q86YQ8 564 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 OR10T2Q8NGX3 314 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 IPO4Q8TEX9 1081 aaKnown RBP13.92□□□□□ -0.18
VRK3-205ENST00000593919 RUBCNQ92622 972 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 PCED1BQ96HM7 432 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 MCEEQ96PE7 176 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 ACBD6Q9BR61 282 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 AMFRQ9UKV5 643 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 HPCAL4Q9UM19 191 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 FAN1Q9Y2M0 1017 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 NT5C1B-RDH14C9J2C7 533 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 GOLGA8SH3BPF8 625 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 MYO1FO00160 1098 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 TRAPPC3O43617 180 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 CEP104O60308 925 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 AMHP03971 560 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 GALTP07902 379 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 PPP1R15BQ5SWA1 713 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 PAQR9Q6ZVX9 377 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 FEZF2Q8TBJ5 459 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 HES6Q96HZ4 224 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 PBKQ96KB5 322 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 KRT12Q99456 494 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 TMEM175Q9BSA9 504 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 IL23AQ9NPF7 189 aa13.92□□□□□ -0.18
VRK3-205ENST00000593919 KIAA1671Q9BY89 1806 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 EFCAB14O75071 495 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 COMTP21964 271 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 PLCB3Q01970 1234 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 ZNF268Q14587 947 aaPredicted RBP13.91□□□□□ -0.18
VRK3-205ENST00000593919 INTS6LQ5JSJ4 861 aaKnown RBP13.91□□□□□ -0.18
VRK3-205ENST00000593919 FAM117BQ6P1L5 589 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 OTOP2Q7RTS6 562 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 TMEM173Q86WV6 379 aaPredicted RBP13.91□□□□□ -0.18
VRK3-205ENST00000593919 MYCBPAPQ8TBZ2 947 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 AENQ8WTP8 325 aaKnown RBP13.91□□□□□ -0.18
VRK3-205ENST00000593919 STK32AQ8WU08 396 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 TMEM209Q96SK2 561 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 MED10Q9BTT4 135 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 COLEC11Q9BWP8 271 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 SLC4A5Q9BY07 1137 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 DUSP16Q9BY84 665 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 B3GNT5Q9BYG0 378 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 GPR62Q9BZJ7 368 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 RC3H2Q9HBD1 1191 aaKnown RBP13.91□□□□□ -0.18
VRK3-205ENST00000593919 KRT82Q9NSB4 513 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 VPS18Q9P253 973 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 WDR35Q9P2L0 1181 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 PRKAG2Q9UGJ0 569 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 CEP290O15078 2479 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 TMEM191CA6NGB0 347 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 CES2O00748 559 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 GABBR2O75899 941 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 BEST1O76090 585 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 BAIAP3O94812 1187 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 NPR3P17342 541 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 GLE1Q53GS7 698 aaKnown RBP13.91□□□□□ -0.18
VRK3-205ENST00000593919 HSP90B2PQ58FF3 399 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 FAM171BQ6P995 826 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 DCUN1D2Q6PH85 259 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 CLEC20AQ6ZU45 233 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 FAM183BPQ6ZVS7 135 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 SND1Q7KZF4 910 aaKnown RBP eCLIP13.91□□□□□ -0.18
VRK3-205ENST00000593919 C16orf59Q7L2K0 433 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 TMEM110Q86TL2 294 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 FAM35AQ86V20 835 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 KLHL7Q8IXQ5 586 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 THEM5Q8N1Q8 247 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 ZNF689Q96CS4 500 aaPredicted RBP13.91□□□□□ -0.18
VRK3-205ENST00000593919 MCRS1Q96EZ8 462 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 PIWIL1Q96J94 861 aaKnown RBP13.91□□□□□ -0.18
VRK3-205ENST00000593919 PKMYT1Q99640 499 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 CWH43Q9H720 699 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 VIPAS39Q9H9C1 493 aa13.91□□□□□ -0.18
VRK3-205ENST00000593919 METTL5Q9NRN9 209 aaKnown RBP13.91□□□□□ -0.18
VRK3-205ENST00000593919 RANBP2P49792 3224 aaKnown RBP13.9□□□□□ -0.18
VRK3-205ENST00000593919 SF3B1O75533 1304 aaKnown RBP eCLIP13.9□□□□□ -0.183e-6■■■■■ 137.9
VRK3-205ENST00000593919 PATJQ8NI35 1801 aa13.9□□□□□ -0.18
VRK3-205ENST00000593919 SIGLEC16A6NMB1 481 aa13.9□□□□□ -0.18
VRK3-205ENST00000593919 XPO1O14980 1071 aaKnown RBP13.9□□□□□ -0.18
VRK3-205ENST00000593919 SYN3O14994 580 aa13.9□□□□□ -0.18
VRK3-205ENST00000593919 SPOPO43791 374 aa13.9□□□□□ -0.18
VRK3-205ENST00000593919 HEXIM1O94992 359 aaKnown RBP13.9□□□□□ -0.18
VRK3-205ENST00000593919 KRT3P12035 628 aa13.9□□□□□ -0.18
VRK3-205ENST00000593919 TAP1Q03518 808 aa13.9□□□□□ -0.18
VRK3-205ENST00000593919 ZNF252P-AS1Q0IIN9 211 aa13.9□□□□□ -0.18
VRK3-205ENST00000593919 FAM102AQ5T9C2 384 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms