RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 GAB3Q8WWW8 586 aa21.85■■□□□ 1.09
TRIM47-207ENST00000593089 CD101Q93033 1021 aa21.85■■□□□ 1.09
TRIM47-207ENST00000593089 EXOC4Q96A65 974 aa21.85■■□□□ 1.09
TRIM47-207ENST00000593089 MAGEF1Q9HAY2 307 aa21.85■■□□□ 1.09
TRIM47-207ENST00000593089 SLC39A2Q9NP94 309 aa21.85■■□□□ 1.09
TRIM47-207ENST00000593089 TRPM5Q9NZQ8 1165 aa21.85■■□□□ 1.09
TRIM47-207ENST00000593089 MYO16Q9Y6X6 1858 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 TRIM66O15016 1216 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 TACC1O75410 805 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 RPP40O75818 363 aaKnown RBP21.84■■□□□ 1.09
TRIM47-207ENST00000593089 CCDC192P0DO97 292 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 AFMP43652 599 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 SNRPFP62306 86 aaKnown RBP21.84■■□□□ 1.09
TRIM47-207ENST00000593089 PSMD2Q13200 908 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 RPLP0P6Q8NHW5 317 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 ZNF516Q92618 1163 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 LINC00597Q9H2U6 94 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 DPEP3Q9H4B8 488 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 FAM13BQ9NYF5 915 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 PCDHA7Q9UN72 937 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 ARHGAP26Q9UNA1 814 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 EML5Q05BV3 1969 aa21.84■■□□□ 1.09
TRIM47-207ENST00000593089 KIAA1549LQ6ZVL6 1849 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 F8VP50 259 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 AXIN1O15169 862 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 F13A1P00488 732 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 ZSCAN22P10073 491 aaPredicted RBP21.83■■□□□ 1.09
TRIM47-207ENST00000593089 ME1P48163 572 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 PDE6CP51160 858 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 MYL6P60660 151 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 NR1H3Q13133 447 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 TRPC3Q13507 836 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 CUL4BQ13620 913 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 FBXO43Q4G163 708 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 EZH1Q92800 747 aaPredicted RBP21.83■■□□□ 1.09
TRIM47-207ENST00000593089 SNX21Q969T3 373 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 CEP295NLQ96MC4 621 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 HHIPQ96QV1 700 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 EHD2Q9NZN4 543 aa21.83■■□□□ 1.09
TRIM47-207ENST00000593089 NXF1Q9UBU9 619 aaKnown RBP21.83■■□□□ 1.09
TRIM47-207ENST00000593089 CCDC163A0A0D9SF12 145 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 A8MXQ7 604 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 GDF9O60383 454 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 CLSTN1O94985 981 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 ABL1P00519 1130 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 HSP90AA1P07900 732 aaKnown RBP21.82■■□□□ 1.08
TRIM47-207ENST00000593089 TCF3P15923 654 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 PTPN1P18031 435 aaKnown RBP21.82■■□□□ 1.08
TRIM47-207ENST00000593089 CACNA2D1P54289 1103 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 ZXDBP98169 803 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 IFRD2Q12894 506 aaPredicted RBP21.82■■□□□ 1.08
TRIM47-207ENST00000593089 CACNA2D4Q7Z3S7 1137 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 KBTBD6Q86V97 674 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 GRAMD1CQ8IYS0 662 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 C8orf48Q96LL4 319 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 TTLL2Q9BWV7 592 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 GZF1Q9H116 711 aaPredicted RBP21.82■■□□□ 1.08
TRIM47-207ENST00000593089 ARRDC1-AS1Q9H2J1 176 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 SPAG17Q6Q759 2223 aa21.82■■□□□ 1.08
TRIM47-207ENST00000593089 NCOR2Q9Y618 2525 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 PVALEFA0A1B0GWK0 134 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 LEFTY2O00292 366 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 SLC30A4O14863 429 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 EXOC3O60645 756 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 PHACTR2O75167 634 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 NFATC1O95644 943 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 CASP4P49662 377 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 NOP14P78316 857 aaKnown RBP21.81■■□□□ 1.08
TRIM47-207ENST00000593089 CCDC6Q16204 474 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 KNOP1Q1ED39 458 aaKnown RBP21.81■■□□□ 1.08
TRIM47-207ENST00000593089 BMT2Q1RMZ1 405 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 RESP18Q5W5W9 173 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 HSCBQ8IWL3 235 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 C12orf56Q8IXR9 622 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 CAMKK1Q8N5S9 505 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 ZNF518BQ9C0D4 1074 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 TMEM30AQ9NV96 361 aa21.81■■□□□ 1.08
TRIM47-207ENST00000593089 ZNF840PA6NDX5 716 aa21.8■■□□□ 1.08
TRIM47-207ENST00000593089 CLDN5O00501 218 aa21.8■■□□□ 1.08
TRIM47-207ENST00000593089 FAM163BP0C2L3 166 aa21.8■■□□□ 1.08
TRIM47-207ENST00000593089 PFKLP17858 780 aa21.8■■□□□ 1.08
TRIM47-207ENST00000593089 BIRC3Q13489 604 aa21.8■■□□□ 1.08
TRIM47-207ENST00000593089 DMC1Q14565 340 aa21.8■■□□□ 1.08
TRIM47-207ENST00000593089 TDRD10Q5VZ19 366 aaKnown RBP21.8■■□□□ 1.08
TRIM47-207ENST00000593089 SYT13Q7L8C5 426 aa21.8■■□□□ 1.08
TRIM47-207ENST00000593089 PLEKHO2Q8TD55 490 aa21.8■■□□□ 1.08
TRIM47-207ENST00000593089 SYAP1Q96A49 352 aaPredicted RBP21.8■■□□□ 1.08
TRIM47-207ENST00000593089 ELOVL4Q9GZR5 314 aa21.8■■□□□ 1.08
TRIM47-207ENST00000593089 RNF38Q9H0F5 515 aa21.8■■□□□ 1.08
TRIM47-207ENST00000593089 XYLT2Q9H1B5 865 aa21.8■■□□□ 1.08
TRIM47-207ENST00000593089 CGNQ9P2M7 1197 aaKnown RBP21.8■■□□□ 1.08
TRIM47-207ENST00000593089 SERTAD1Q9UHV2 236 aa21.8■■□□□ 1.08
TRIM47-207ENST00000593089 SDK1Q7Z5N4 2213 aa21.79■■□□□ 1.08
TRIM47-207ENST00000593089 FOXD2O60548 495 aaPredicted RBP21.79■■□□□ 1.08
TRIM47-207ENST00000593089 EPN2O95208 641 aa21.79■■□□□ 1.08
TRIM47-207ENST00000593089 STAU1O95793 577 aaKnown RBP21.79■■□□□ 1.08
TRIM47-207ENST00000593089 ATICP31939 592 aa21.79■■□□□ 1.08
TRIM47-207ENST00000593089 PPP3CCP48454 512 aa21.79■■□□□ 1.08
TRIM47-207ENST00000593089 TAF10Q12962 218 aa21.79■■□□□ 1.08
TRIM47-207ENST00000593089 SF3A2Q15428 464 aaKnown RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms