RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 A0A1B0GTW7 788 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 GOLGA6L6A8MZA4 724 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 COQ9O75208 318 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 SPATA31D3P0C874 917 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 KCNA2P16389 499 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 ATICP31939 592 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 ZNF134P52741 427 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 LILRA4P59901 499 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 KRT17Q04695 432 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 NSUN2Q08J23 767 aaKnown RBP eCLIP7.33□□□□□ -1.24
VMP1-215ENST00000592619 ZIK1Q3SY52 487 aaPredicted RBP7.33□□□□□ -1.24
VMP1-215ENST00000592619 TBC1D10BQ4KMP7 808 aaPredicted RBP7.33□□□□□ -1.24
VMP1-215ENST00000592619 FAXCQ5TGI0 409 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 LIN54Q6MZP7 749 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 SLC30A10Q6XR72 485 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 SPOCD1Q6ZMY3 1216 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 SPATA31D4Q6ZUB0 917 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 Q8NA96 180 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 NSUN7Q8NE18 718 aaKnown RBP7.33□□□□□ -1.24
VMP1-215ENST00000592619 ZNF483Q8TF39 744 aaPredicted RBP7.33□□□□□ -1.24
VMP1-215ENST00000592619 UBXN10Q96LJ8 280 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 DCLRE1CQ96SD1 692 aaKnown RBP7.33□□□□□ -1.24
VMP1-215ENST00000592619 PRPF18Q99633 342 aaKnown RBP7.33□□□□□ -1.24
VMP1-215ENST00000592619 PDP2Q9P2J9 529 aa7.33□□□□□ -1.24
VMP1-215ENST00000592619 HERC5Q9UII4 1024 aaKnown RBP7.33□□□□□ -1.24
VMP1-215ENST00000592619 NAP1L2Q9ULW6 460 aaPredicted RBP7.33□□□□□ -1.24
VMP1-215ENST00000592619 SCAF8Q9UPN6 1271 aaKnown RBP7.33□□□□□ -1.24
VMP1-215ENST00000592619 ZCCHC11Q5TAX3 1644 aaKnown RBP7.33□□□□□ -1.24
VMP1-215ENST00000592619 ZNF536O15090 1300 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 SPATA31A3Q5VYP0 1347 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 OR2W5A6NFC9 320 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 NCAM2O15394 837 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 ANP32CO43423 234 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 SUN1O94901 812 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 TNFRSF6BO95407 300 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 PLATP00750 562 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 ITGA2BP08514 1039 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 KCNA3P22001 575 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 MST1P26927 711 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 CNR2P34972 360 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 ANXA11P50995 505 aaKnown RBP7.32□□□□□ -1.24
VMP1-215ENST00000592619 LCE4AQ5TA78 99 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 KCTD20Q7Z5Y7 419 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 BPIFB1Q8TDL5 484 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 RSC1A1Q92681 617 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 ZSCAN31Q96LW9 406 aaPredicted RBP7.32□□□□□ -1.24
VMP1-215ENST00000592619 TOX2Q96NM4 488 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 PTDSS2Q9BVG9 487 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 TRIM5Q9C035 493 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 RRN3Q9NYV6 651 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 TMOD4Q9NZQ9 345 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 FHOD3Q2V2M9 1422 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 FMN1Q68DA7 1419 aa7.32□□□□□ -1.24
VMP1-215ENST00000592619 A0A1B0GVC2 190 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 CYP27B1O15528 508 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 ASNA1O43681 348 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 PIAS2O75928 621 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 NTSR2O95665 410 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 SRGNP10124 158 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 CHRM3P20309 590 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 FGFR4P22455 802 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 MYO1EQ12965 1108 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 MANEALQ5VSG8 457 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 SGMS1Q86VZ5 419 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 CIR1Q86X95 450 aaPredicted RBP7.31□□□□□ -1.24
VMP1-215ENST00000592619 SUGP1Q8IWZ8 645 aaKnown RBP7.31□□□□□ -1.24
VMP1-215ENST00000592619 SPPL3Q8TCT6 385 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 USP13Q92995 863 aaPredicted RBP7.31□□□□□ -1.24
VMP1-215ENST00000592619 PPP2R3CQ969Q6 453 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 ZNF668Q96K58 619 aaPredicted RBP7.31□□□□□ -1.24
VMP1-215ENST00000592619 RBM15Q96T37 977 aaKnown RBP eCLIP7.31□□□□□ -1.249e-6■□□□□ 8.2
VMP1-215ENST00000592619 FAM167BQ9BTA0 163 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 SMOC2Q9H3U7 446 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 HELLSQ9NRZ9 838 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 HPSEQ9Y251 543 aa7.31□□□□□ -1.24
VMP1-215ENST00000592619 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.31□□□□□ -1.24
VMP1-215ENST00000592619 MTO1Q9Y2Z2 717 aaKnown RBP7.31□□□□□ -1.24
VMP1-215ENST00000592619 USP15Q9Y4E8 981 aaPredicted RBP7.31□□□□□ -1.24
VMP1-215ENST00000592619 DIP2BQ9P265 1576 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 KIF13AQ9H1H9 1805 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 A0A1W2PS29 197 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 CCDC78A2IDD5 438 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 CAPN14A8MX76 684 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 GPR42O15529 346 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 FAM155BO75949 473 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 GPANK1O95872 356 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 HLA-DOAP06340 250 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 PECAM1P16284 738 aaPredicted RBP7.3□□□□□ -1.24
VMP1-215ENST00000592619 ITGALP20701 1170 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 PPIFP30405 207 aaKnown RBP7.3□□□□□ -1.24
VMP1-215ENST00000592619 APOBEC3AP31941 199 aaPredicted RBP7.3□□□□□ -1.24
VMP1-215ENST00000592619 KCNAB1Q14722 419 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 TAF5Q15542 800 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 ZNF124Q15973 351 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 FBXO47Q5MNV8 452 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 CACHD1Q5VU97 1274 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 JAKMIP3Q5VZ66 844 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 SFRP4Q6FHJ7 346 aaPredicted RBP7.3□□□□□ -1.24
VMP1-215ENST00000592619 SULT6B1Q6IMI4 303 aa7.3□□□□□ -1.24
VMP1-215ENST00000592619 FOXR2Q6PJQ5 311 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms