RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 PORCNQ9H237 461 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 JPH1Q9HDC5 661 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 SLC9A2Q9UBY0 812 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 XPO7Q9UIA9 1087 aaKnown RBP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 STRIP2Q9ULQ0 834 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 EP400Q96L91 3159 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 TBX10O75333 385 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 FAM155BO75949 473 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 UPP2O95045 317 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 ESRRAP11474 423 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 NEFHP12036 1026 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 SKIP12755 728 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 SP100P23497 879 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 PSMC4P43686 418 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 ACTR2P61160 394 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 UNC45BQ8IWX7 931 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 SPDYE1Q8NFV5 336 aaPredicted RBP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 FNIP1Q8TF40 1166 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 VCXQ9H320 206 aa15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.54■□□□□ 0.08
SMARCA4-219ENST00000592604 A8MXQ7 604 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 CAPN9O14815 690 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 LRCH4O75427 683 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 IL1R2P27930 398 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 RFC1P35251 1148 aaPredicted RBP15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 PTK7Q13308 1070 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 SMYD5Q6GMV2 418 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 CCDC62Q6P9F0 684 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 LRRC74BQ6ZQY2 392 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 DEPTORQ8TB45 409 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 TMEM143Q96AN5 459 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 OXNAD1Q96HP4 312 aaPredicted RBP15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 GINM1Q9NU53 330 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 FBXO40Q9UH90 709 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 PSMA2P25787 234 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 RAP1GDS1P52306 607 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 SESN3P58005 492 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 TGFB2P61812 414 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 AP1B1Q10567 949 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 HADHQ16836 314 aaKnown RBP15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 IGDCC3Q8IVU1 814 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 WDR60Q8WVS4 1066 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 FAM111AQ96PZ2 611 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 CISHQ9NSE2 258 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 ZNF212Q9UDV6 495 aa15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 CTDP1Q9Y5B0 961 aaPredicted RBP15.53■□□□□ 0.08
SMARCA4-219ENST00000592604 ANKRD33BA6NCL7 494 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 ATG7O95352 703 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 BGNP21810 368 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 CHRNA5P30532 468 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 ARL2P36404 184 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 ZNF200P98182 395 aaPredicted RBP15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 FAAP100Q0VG06 881 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 DGKZQ13574 1117 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 DPYSL3Q14195 570 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 ZRSR2Q15696 482 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 CYP4A22Q5TCH4 519 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 OR52E8Q6IFG1 317 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 MTMR14Q8NCE2 650 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 FLAD1Q8NFF5 587 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 TFAP2BQ92481 460 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 TSC22D3Q99576 134 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 DHX33Q9H6R0 707 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 ARHGEF4Q9NR80 690 aa15.52■□□□□ 0.08
SMARCA4-219ENST00000592604 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 TCRBV9S1A1TA0A576 114 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 FCHO1O14526 889 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 MAGEC1O60732 1142 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 SPAG6O75602 509 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 MYL2P10916 166 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 ELK3P41970 407 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 SERPINB4P48594 390 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 GRM1Q13255 1194 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 BRSK2Q8IWQ3 736 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 SCYL3Q8IZE3 742 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 ARHGAP24Q8N264 748 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 IFT43Q96FT9 208 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 TMEM134Q9H6X4 195 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 ZWILCHQ9H900 591 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 PNPLA8Q9NP80 782 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 ETAA1Q9NY74 926 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 CHMP2BQ9UQN3 213 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 TEX264Q9Y6I9 313 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 IKBKGQ9Y6K9 419 aa15.52■□□□□ 0.07
SMARCA4-219ENST00000592604 LRRIQ4A6NIV6 560 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 APOC4-APOC2K7ER74 178 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 STAM2O75886 525 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 APOC2P02655 101 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 EDN1P05305 212 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 KRT3P12035 628 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 SMTNL2Q2TAL5 461 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 KBTBD12Q3ZCT8 623 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 THEMIS2Q5TEJ8 643 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 WDR49Q8IV35 697 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 KIAA0319LQ8IZA0 1049 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 UCMAQ8WVF2 138 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 TEKT4Q8WW24 435 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 TTC17Q96AE7 1141 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 CDHR1Q96JP9 859 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms