RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 ZBTB33Q86T24 672 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 SLC44A1Q8WWI5 657 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 JDP2Q8WYK2 163 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 ZWILCHQ9H900 591 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 RSAD1Q9HA92 442 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 XPO7Q9UIA9 1087 aaKnown RBP12.15□□□□□ -0.47
ZNF540-210ENST00000592533 SUFUQ9UMX1 484 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 POLIQ9UNA4 740 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 TEX264Q9Y6I9 313 aa12.15□□□□□ -0.47
ZNF540-210ENST00000592533 TCRBV7S3A2A0A539 114 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 KLF11O14901 512 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 LUC7L3O95232 432 aaKnown RBP12.14□□□□□ -0.47
ZNF540-210ENST00000592533 TNNC2P02585 160 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 TPBGLP0DKB5 382 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 GM2AP17900 193 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 STIP1P31948 543 aaKnown RBP12.14□□□□□ -0.47
ZNF540-210ENST00000592533 PSMC1P62191 440 aaKnown RBP12.14□□□□□ -0.47
ZNF540-210ENST00000592533 DPYSL3Q14195 570 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 ZNF394Q53GI3 561 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 WDR78Q5VTH9 848 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 ZBTB8OSQ8IWT0 167 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 SLC4A11Q8NBS3 891 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 APOPT1Q96IL0 206 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 CPXM1Q96SM3 734 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 FRMD8Q9BZ67 464 aaPredicted RBP12.14□□□□□ -0.47
ZNF540-210ENST00000592533 MANSC1Q9H8J5 431 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 NKX1-2Q9UD57 310 aaPredicted RBP12.14□□□□□ -0.47
ZNF540-210ENST00000592533 IQANK1A0A1B0GTG1 560 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 ZBTB42B2RXF5 422 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 IL18RAPO95256 599 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 TRUB2O95900 331 aaKnown RBP12.14□□□□□ -0.47
ZNF540-210ENST00000592533 ERBB2P04626 1255 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 DYNLT1P63172 113 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 CNTN2Q02246 1040 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 NOMO1Q15155 1222 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 SMTNL2Q2TAL5 461 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 LONP2Q86WA8 852 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 FBXO41Q8TF61 875 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 RTP4Q96DX8 246 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 PTCD3Q96EY7 689 aaKnown RBP12.14□□□□□ -0.47
ZNF540-210ENST00000592533 ANKRD36BP1Q96IX9 119 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 FAM124BQ9H5Z6 455 aaPredicted RBP12.14□□□□□ -0.47
ZNF540-210ENST00000592533 NPHS2Q9NP85 383 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 CNTN3Q9P232 1028 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 TJP2Q9UDY2 1190 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 PLXNA1Q9UIW2 1896 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 NUMBLQ9Y6R0 609 aa12.14□□□□□ -0.47
ZNF540-210ENST00000592533 HGSO14964 777 aaPredicted RBP12.13□□□□□ -0.47
ZNF540-210ENST00000592533 MCF2LO15068 1137 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 CHADO15335 359 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 LGR5O75473 907 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 LMNAP02545 664 aaKnown RBP12.13□□□□□ -0.47
ZNF540-210ENST00000592533 C1QAP02745 245 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 CD48P09326 243 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 EIF3EP60228 445 aaKnown RBP12.13□□□□□ -0.47
ZNF540-210ENST00000592533 PRKD1Q15139 912 aaPredicted RBP12.13□□□□□ -0.47
ZNF540-210ENST00000592533 METTL7BQ6UX53 244 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 PALM2Q8IXS6 379 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 MICALL2Q8IY33 904 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 SKA1Q96BD8 255 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 FZD8Q9H461 694 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 VRTNQ9H8Y1 702 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 SLC17A7Q9P2U7 560 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 AFG3L2Q9Y4W6 797 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 ACKR2O00590 384 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 CBX6O95503 412 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 MIPP30301 263 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 GCKP35557 465 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 MAGEA6P43360 314 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 TFAMQ00059 246 aaKnown RBP12.13□□□□□ -0.47
ZNF540-210ENST00000592533 KCNT1Q5JUK3 1230 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 SCARA5Q6ZMJ2 495 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 CYP4V2Q6ZWL3 525 aaPredicted RBP12.13□□□□□ -0.47
ZNF540-210ENST00000592533 SEPT1Q8WYJ6 367 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 APBB2Q92870 758 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 TCHPQ9BT92 498 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 TRIM55Q9BYV6 548 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 METTL5Q9NRN9 209 aaKnown RBP12.13□□□□□ -0.47
ZNF540-210ENST00000592533 SIX4Q9UIU6 781 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 TCRBV9S1A1TA0A576 114 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 MARK3P27448 753 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 EPHB2P29323 1055 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 TCF7P36402 384 aaPredicted RBP12.13□□□□□ -0.47
ZNF540-210ENST00000592533 PSMC4P43686 418 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 BLMHQ13867 455 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 KRT72Q14CN4 511 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 NAA25Q14CX7 972 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 FAM47CQ5HY64 1035 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 MTDHQ86UE4 582 aaKnown RBP12.13□□□□□ -0.47
ZNF540-210ENST00000592533 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.13□□□□□ -0.47
ZNF540-210ENST00000592533 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.13□□□□□ -0.47
ZNF540-210ENST00000592533 KCTD6Q8NC69 237 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 CXorf38Q8TB03 319 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 KCNK13Q9HB14 408 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 MKS1Q9NXB0 559 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 USP18Q9UMW8 372 aa12.13□□□□□ -0.47
ZNF540-210ENST00000592533 MTO1Q9Y2Z2 717 aaKnown RBP12.13□□□□□ -0.47
ZNF540-210ENST00000592533 OTOFQ9HC10 1997 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 RBP3P10745 1247 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 ZNF143P52747 638 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms