RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 TMEM8AQ9HCN3 771 aa21.47■■□□□ 1.03
CIRBP-239ENST00000592467 HPS4Q9NQG7 708 aa21.47■■□□□ 1.03
CIRBP-239ENST00000592467 MRPS17Q9Y2R5 130 aaKnown RBP21.47■■□□□ 1.03
CIRBP-239ENST00000592467 SMC2O95347 1197 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 SP9P0CG40 484 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 CHRNB1P11230 501 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 KRT13P13646 458 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 CD44P16070 742 aaKnown RBP21.46■■□□□ 1.03
CIRBP-239ENST00000592467 CCNE1P24864 410 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 GTF2H1P32780 548 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 NDST1P52848 882 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 ZXDBP98169 803 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 PLCB2Q00722 1185 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 INCA1Q0VD86 236 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 ACOT1Q86TX2 421 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 FAM35AQ86V20 835 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 FUKQ8N0W3 1084 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 CSGALNACT1Q8TDX6 532 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 SEMA4DQ92854 862 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 TWNKQ96RR1 684 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 KCNK16Q96T55 309 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 KIF9Q9HAQ2 790 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.46■■□□□ 1.031e-7■■■■■ 115.4
CIRBP-239ENST00000592467 GKN1Q9NS71 199 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 MAN1B1Q9UKM7 699 aa21.46■■□□□ 1.03
CIRBP-239ENST00000592467 NDRG2Q9UN36 371 aaKnown RBP21.46■■□□□ 1.03
CIRBP-239ENST00000592467 ZFHX2Q9C0A1 2572 aaPredicted RBP21.45■■□□□ 1.03
CIRBP-239ENST00000592467 TRIM49BA6NDI0 452 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 OTOL1A6NHN0 477 aaPredicted RBP21.45■■□□□ 1.02
CIRBP-239ENST00000592467 SPECC1L-ADORA2AF8WAN1 911 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 TNFRSF10BO14763 440 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 CETN3O15182 167 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 P4HA1P13674 534 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 ANXA13P27216 316 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 CTHP32929 405 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 USP4Q13107 963 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 ORC1Q13415 861 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 ZNF77Q15935 545 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 ASCL5Q7RTU5 278 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 UNC93AQ86WB7 457 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 ARL14EPQ8N8R7 260 aaPredicted RBP21.45■■□□□ 1.02
CIRBP-239ENST00000592467 ZMIZ2Q8NF64 920 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 TTC8Q8TAM2 541 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 WHAMMQ8TF30 809 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 MSANTD3Q96H12 275 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 TNIP3Q96KP6 325 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 C8orf33Q9H7E9 229 aaPredicted RBP21.45■■□□□ 1.02
CIRBP-239ENST00000592467 IL37Q9NZH6 218 aa21.45■■□□□ 1.02
CIRBP-239ENST00000592467 ZNF840PA6NDX5 716 aa21.44■■□□□ 1.02
CIRBP-239ENST00000592467 OLFM2O95897 454 aa21.44■■□□□ 1.02
CIRBP-239ENST00000592467 TCF3P15923 654 aa21.44■■□□□ 1.02
CIRBP-239ENST00000592467 KRT39Q6A163 491 aa21.44■■□□□ 1.02
CIRBP-239ENST00000592467 TRIM68Q6AZZ1 485 aa21.44■■□□□ 1.02
CIRBP-239ENST00000592467 RALGPS2Q86X27 583 aaPredicted RBP21.44■■□□□ 1.02
CIRBP-239ENST00000592467 CHRDQ9H2X0 955 aa21.44■■□□□ 1.02
CIRBP-239ENST00000592467 MMRN2Q9H8L6 949 aa21.44■■□□□ 1.02
CIRBP-239ENST00000592467 CSNK1G1Q9HCP0 422 aa21.44■■□□□ 1.02
CIRBP-239ENST00000592467 TRPC7Q9HCX4 862 aa21.44■■□□□ 1.02
CIRBP-239ENST00000592467 MYH10P35580 1976 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 TRAV19A0A0A6YYK7 116 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 NCAM2O15394 837 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 SLC16A3O15427 465 aaKnown RBP21.43■■□□□ 1.02
CIRBP-239ENST00000592467 BEST1O76090 585 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 USP17L7P0C7H9 530 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 FKBP3Q00688 224 aaKnown RBP21.43■■□□□ 1.02
CIRBP-239ENST00000592467 MTAPQ13126 283 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 GAS6Q14393 721 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 ISM2Q6H9L7 571 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 C12orf29Q8N999 325 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 SMOQ99835 787 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 NIF3L1Q9GZT8 377 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 RNF38Q9H0F5 515 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 LMAN1LQ9HAT1 526 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 CYP3A43Q9HB55 503 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 PRMT8Q9NR22 394 aaPredicted RBP21.43■■□□□ 1.02
CIRBP-239ENST00000592467 SPATA6Q9NWH7 488 aaPredicted RBP21.43■■□□□ 1.02
CIRBP-239ENST00000592467 THG1LQ9NWX6 298 aaKnown RBP21.43■■□□□ 1.02
CIRBP-239ENST00000592467 ARHGAP26Q9UNA1 814 aa21.43■■□□□ 1.02
CIRBP-239ENST00000592467 FAM92AA1XBS5 289 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 PRR23AA6NEV1 266 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 GFRA3O60609 400 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 OAS1P00973 400 aaKnown RBP21.42■■□□□ 1.02
CIRBP-239ENST00000592467 EPB41P11171 864 aaKnown RBP21.42■■□□□ 1.02
CIRBP-239ENST00000592467 CCDC130P13994 396 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 PFKLP17858 780 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 KPNA1P52294 538 aaPredicted RBP21.42■■□□□ 1.02
CIRBP-239ENST00000592467 LRRC63Q05C16 580 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 TAF10Q12962 218 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 MORC3Q14149 939 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 MTF1Q14872 753 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 ITPRIPL2Q3MIP1 535 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 CBWD6Q4V339 395 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 CBWD3Q5JTY5 395 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 CBWD5Q5RIA9 395 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 C1orf228Q6PIY5 440 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 MAMSTRQ6ZN01 415 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 NUP93Q8N1F7 819 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 SCAMP5Q8TAC9 235 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 NELL1Q92832 810 aa21.42■■□□□ 1.02
CIRBP-239ENST00000592467 SMARCD1Q96GM5 515 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms