RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 GJA4P35212 333 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 GALK1P51570 392 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 USP4Q13107 963 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 TRPC3Q13507 836 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 CUL4BQ13620 913 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 WDR72Q3MJ13 1102 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 MDH1BQ5I0G3 518 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 WDR5BQ86VZ2 330 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 GRAMD1CQ8IYS0 662 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 MYCBPAPQ8TBZ2 947 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 SPATA32Q96LK8 384 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 P2RY13Q9BPV8 354 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 EHD2Q9NZN4 543 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 GCNT4Q9P109 453 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 SLC8A2Q9UPR5 921 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 WNT6Q9Y6F9 365 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 KIAA1549LQ6ZVL6 1849 aa19.58■□□□□ 0.72
CIRBP-237ENST00000592234 LRP3O75074 770 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 RNF40O75150 1001 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 DRD1P21728 446 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 PDE6CP51160 858 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 ATXN1P54253 815 aaKnown RBP19.57■□□□□ 0.72
CIRBP-237ENST00000592234 KRT85P78386 507 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 KNOP1Q1ED39 458 aaKnown RBP19.57■□□□□ 0.72
CIRBP-237ENST00000592234 BMT2Q1RMZ1 405 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 C12orf56Q8IXR9 622 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 CEP57L1Q8IYX8 460 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 SH3RF2Q8TEC5 729 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 ZNF516Q92618 1163 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 ATP2A3Q93084 1043 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 TRPM5Q9NZQ8 1165 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 SERTAD1Q9UHV2 236 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 SDK1Q7Z5N4 2213 aa19.57■□□□□ 0.72
CIRBP-237ENST00000592234 EXOC3O60645 756 aa19.56■□□□□ 0.72
CIRBP-237ENST00000592234 PHACTR2O75167 634 aa19.56■□□□□ 0.72
CIRBP-237ENST00000592234 CLSTN1O94985 981 aa19.56■□□□□ 0.72
CIRBP-237ENST00000592234 FAM163BP0C2L3 166 aa19.56■□□□□ 0.72
CIRBP-237ENST00000592234 USP46P62068 366 aa19.56■□□□□ 0.72
CIRBP-237ENST00000592234 BECN1Q14457 450 aa19.56■□□□□ 0.72
CIRBP-237ENST00000592234 EML3Q32P44 896 aa19.56■□□□□ 0.72
CIRBP-237ENST00000592234 SYAP1Q96A49 352 aaPredicted RBP19.56■□□□□ 0.72
CIRBP-237ENST00000592234 FBRSL1Q9HCM7 1045 aaKnown RBP19.56■□□□□ 0.72
CIRBP-237ENST00000592234 NXF1Q9UBU9 619 aaKnown RBP19.56■□□□□ 0.72
CIRBP-237ENST00000592234 ARHGAP26Q9UNA1 814 aa19.56■□□□□ 0.72
CIRBP-237ENST00000592234 NME7Q9Y5B8 376 aa19.56■□□□□ 0.72
CIRBP-237ENST00000592234 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.56■□□□□ 0.72
CIRBP-237ENST00000592234 A0A1B0GVL5 298 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 A8MXQ7 604 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 F8VP50 259 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 STAU1O95793 577 aaKnown RBP19.55■□□□□ 0.72
CIRBP-237ENST00000592234 TCF3P15923 654 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 PFKLP17858 780 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 PTPN1P18031 435 aaKnown RBP19.55■□□□□ 0.72
CIRBP-237ENST00000592234 ATICP31939 592 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 PXNP49023 591 aaPredicted RBP19.55■□□□□ 0.72
CIRBP-237ENST00000592234 MYL6P60660 151 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 NR1H3Q13133 447 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 FBXO43Q4G163 708 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 NAIF1Q69YI7 327 aaPredicted RBP19.55■□□□□ 0.72
CIRBP-237ENST00000592234 CD101Q93033 1021 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 C8orf48Q96LL4 319 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 TTLL2Q9BWV7 592 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 DPEP3Q9H4B8 488 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 SEMA4GQ9NTN9 838 aa19.55■□□□□ 0.72
CIRBP-237ENST00000592234 CCDC163A0A0D9SF12 145 aa19.54■□□□□ 0.72
CIRBP-237ENST00000592234 PFKFB1P16118 471 aa19.54■□□□□ 0.72
CIRBP-237ENST00000592234 PPP3CCP48454 512 aa19.54■□□□□ 0.72
CIRBP-237ENST00000592234 CASP4P49662 377 aa19.54■□□□□ 0.72
CIRBP-237ENST00000592234 NOP14P78316 857 aaKnown RBP19.54■□□□□ 0.72
CIRBP-237ENST00000592234 BIRC3Q13489 604 aa19.54■□□□□ 0.72
CIRBP-237ENST00000592234 FAM160A2Q8N612 972 aaPredicted RBP19.54■□□□□ 0.72
CIRBP-237ENST00000592234 GOLGA5Q8TBA6 731 aa19.54■□□□□ 0.72
CIRBP-237ENST00000592234 RTKNQ9BST9 563 aa19.54■□□□□ 0.72
CIRBP-237ENST00000592234 ELOVL4Q9GZR5 314 aa19.54■□□□□ 0.72
CIRBP-237ENST00000592234 GZF1Q9H116 711 aaPredicted RBP19.54■□□□□ 0.72
CIRBP-237ENST00000592234 GDPD2Q9HCC8 539 aa19.54■□□□□ 0.72
CIRBP-237ENST00000592234 EXOC1Q9NV70 894 aa19.54■□□□□ 0.72
CIRBP-237ENST00000592234 MYOFQ9NZM1 2061 aa19.54■□□□□ 0.72
CIRBP-237ENST00000592234 LEFTY2O00292 366 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 RPP40O75818 363 aaKnown RBP19.53■□□□□ 0.72
CIRBP-237ENST00000592234 NFATC1O95644 943 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 ABL1P00519 1130 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 SLFN14P0C7P3 912 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 CCDC192P0DO97 292 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 IFRD2Q12894 506 aaPredicted RBP19.53■□□□□ 0.72
CIRBP-237ENST00000592234 PSMD2Q13200 908 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 CSRP2Q16527 193 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 TDRD10Q5VZ19 366 aaKnown RBP19.53■□□□□ 0.72
CIRBP-237ENST00000592234 PRR23CQ6ZRP0 262 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 CAMKK1Q8N5S9 505 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 B3GALNT2Q8NCR0 500 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 RPLP0P6Q8NHW5 317 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 GAB3Q8WWW8 586 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 ZNF518BQ9C0D4 1074 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 XYLT2Q9H1B5 865 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 LINC00597Q9H2U6 94 aa19.53■□□□□ 0.72
CIRBP-237ENST00000592234 ZNF840PA6NDX5 716 aa19.52■□□□□ 0.72
CIRBP-237ENST00000592234 CLDN5O00501 218 aa19.52■□□□□ 0.72
CIRBP-237ENST00000592234 ACTN4O43707 911 aaKnown RBP19.52■□□□□ 0.72
CIRBP-237ENST00000592234 KLRC4O43908 158 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms