RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 FANCCQ00597 558 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 ORC1Q13415 861 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 NR1I3Q14994 352 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 SYCP1Q15431 976 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 CNGA2Q16280 664 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 TAF12Q16514 161 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 DDR2Q16832 855 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 CLEC20AQ6ZU45 233 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 SCN4BQ8IWT1 228 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 NUP93Q8N1F7 819 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 TDRD5Q8NAT2 981 aaKnown RBP10.3□□□□□ -0.76
TPM4-215ENST00000592138 OVCA2Q8WZ82 227 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 SMOQ99835 787 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 CORO1BQ9BR76 489 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 LSM14BQ9BX40 385 aaKnown RBP10.3□□□□□ -0.76
TPM4-215ENST00000592138 C1QTNF1Q9BXJ1 281 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 DUSP16Q9BY84 665 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 STK33Q9BYT3 514 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 GPR88Q9GZN0 384 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 IL21Q9HBE4 155 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 FAM49BQ9NUQ9 324 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 TMEM30AQ9NV96 361 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 HCFC1R1Q9NWW0 138 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 GDE1Q9NZC3 331 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 CDH22Q9UJ99 828 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 TSPAN16Q9UKR8 245 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 CDH7Q9ULB5 785 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 MRPS23Q9Y3D9 190 aaKnown RBP10.3□□□□□ -0.76
TPM4-215ENST00000592138 FHOD1Q9Y613 1164 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 NCANO14594 1321 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 DENND4AQ7Z401 1863 aa10.3□□□□□ -0.76
TPM4-215ENST00000592138 F8VZ95 297 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 RNF225M0QZC1 329 aaPredicted RBP10.29□□□□□ -0.76
TPM4-215ENST00000592138 MED7O43513 233 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 MOSPD3O75425 235 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 SETSIPP0DME0 302 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 KRT5P13647 590 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 PFKLP17858 780 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 DDX6P26196 483 aaKnown RBP eCLIP10.29□□□□□ -0.76
TPM4-215ENST00000592138 ADORA2BP29275 332 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 WEE1P30291 646 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 CCR2P41597 374 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 GPR15P49685 360 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 SLC5A3P53794 718 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 BCAT1P54687 386 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 BPIFB4P59827 614 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 NTHL1P78549 312 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 APBA1Q02410 837 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 BST2Q10589 180 aaKnown RBP10.29□□□□□ -0.76
TPM4-215ENST00000592138 ARHGAP44Q17R89 818 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 SLC5A9Q2M3M2 681 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 PKDCCQ504Y2 493 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 FIGNQ5HY92 759 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 GJB7Q6PEY0 223 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 LCLAT1Q6UWP7 414 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 GET4Q7L5D6 327 aaPredicted RBP10.29□□□□□ -0.76
TPM4-215ENST00000592138 FMNL3Q8IVF7 1028 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 FAM71AQ8IYT1 594 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 HS6ST3Q8IZP7 471 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 ZMIZ2Q8NF64 920 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 NEK11Q8NG66 645 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 GIPC2Q8TF65 315 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 FGF13Q92913 245 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 NXPE3Q969Y0 559 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 GCNAQ96QF7 691 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 KCNK16Q96T55 309 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 FBXO44Q9H4M3 255 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 ZNF334Q9HCZ1 680 aaPredicted RBP10.29□□□□□ -0.76
TPM4-215ENST00000592138 HESX1Q9UBX0 185 aa10.29□□□□□ -0.76
TPM4-215ENST00000592138 AJAP1Q9UKB5 411 aaPredicted RBP10.29□□□□□ -0.76
TPM4-215ENST00000592138 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.29□□□□□ -0.76
TPM4-215ENST00000592138 C2CD4DB7Z1M9 353 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 HHLA1C9JL84 531 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 XPO1O14980 1071 aaKnown RBP10.28□□□□□ -0.76
TPM4-215ENST00000592138 TEX33O43247 280 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 BEST1O76090 585 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 F11P03951 625 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 TPM3P06753 285 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 LAMP2P13473 410 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 CD19P15391 556 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 GABRR2P28476 465 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 GNA15P30679 374 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 PLA2G4AP47712 749 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 KLK7P49862 253 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 UBASH3AP57075 661 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 MAP3K7CLP57077 242 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 JAM2P57087 298 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 PTK2Q05397 1052 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 RAPGEF1Q13905 1077 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 DRAP1Q14919 205 aaPredicted RBP10.28□□□□□ -0.76
TPM4-215ENST00000592138 RAB41Q5JT25 222 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 SNX30Q5VWJ9 437 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 GAREM2Q75VX8 874 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 TTC30AQ86WT1 665 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 NPAS3Q8IXF0 933 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 PDZD8Q8NEN9 1154 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 ITFG1Q8TB96 612 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 SHKBP1Q8TBC3 707 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 GPR152Q8TDT2 470 aa10.28□□□□□ -0.76
TPM4-215ENST00000592138 KCTD13Q8WZ19 329 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms