RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 DYNLT1P63172 113 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 IRX5P78411 483 aaPredicted RBP16.53■□□□□ 0.24
MBD1-227ENST00000592060 MFSD10Q14728 455 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 PPP1R26Q5T8A7 1209 aaPredicted RBP16.53■□□□□ 0.24
MBD1-227ENST00000592060 OR6B2Q6IFH4 312 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 TLK2Q86UE8 772 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 TTC30AQ86WT1 665 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 BEST2Q8NFU1 509 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 RXFP2Q8WXD0 754 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 C18orf25Q96B23 403 aaPredicted RBP16.53■□□□□ 0.24
MBD1-227ENST00000592060 LENG1Q96BZ8 264 aaPredicted RBP16.53■□□□□ 0.24
MBD1-227ENST00000592060 ZNF317Q96PQ6 595 aaPredicted RBP16.53■□□□□ 0.24
MBD1-227ENST00000592060 MIS12Q9H081 205 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 NXF3Q9H4D5 531 aaKnown RBP16.53■□□□□ 0.24
MBD1-227ENST00000592060 SAE1Q9UBE0 346 aaPredicted RBP16.53■□□□□ 0.24
MBD1-227ENST00000592060 SHOC2Q9UQ13 582 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 HES2Q9Y543 173 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 SNX9Q9Y5X1 595 aa16.53■□□□□ 0.24
MBD1-227ENST00000592060 SGK1O00141 431 aa16.52■□□□□ 0.24
MBD1-227ENST00000592060 DPYSL4O14531 572 aa16.52■□□□□ 0.24
MBD1-227ENST00000592060 RECQL4O94761 1208 aa16.52■□□□□ 0.24
MBD1-227ENST00000592060 SETSIPP0DME0 302 aa16.52■□□□□ 0.24
MBD1-227ENST00000592060 YARSP54577 528 aaKnown RBP16.52■□□□□ 0.24
MBD1-227ENST00000592060 RAB6CQ53S08 254 aa16.52■□□□□ 0.24
MBD1-227ENST00000592060 PRCCQ92733 491 aaPredicted RBP16.52■□□□□ 0.24
MBD1-227ENST00000592060 ARHGEF2Q92974 986 aaKnown RBP16.52■□□□□ 0.24
MBD1-227ENST00000592060 SLC4A5Q9BY07 1137 aa16.52■□□□□ 0.24
MBD1-227ENST00000592060 RAB6CQ9H0N0 254 aa16.52■□□□□ 0.24
MBD1-227ENST00000592060 SAYSD1Q9NPB0 183 aa16.52■□□□□ 0.24
MBD1-227ENST00000592060 FARP1Q9Y4F1 1045 aaPredicted RBP16.52■□□□□ 0.24
MBD1-227ENST00000592060 PIK3R2O00459 728 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 NDC80O14777 642 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 ATP5DP30049 168 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 PSEN2P49810 448 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 GDF10P55107 478 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 STAT4Q14765 748 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 SH3PXD2AQ5TCZ1 1133 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 C9orf57Q5W0N0 161 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 C6orf89Q6UWU4 347 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 OLFML1Q6UWY5 402 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 VSTM1Q6UX27 236 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 ACOT1Q86TX2 421 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 RFX6Q8HWS3 928 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 KCTD6Q8NC69 237 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 HSPH1Q92598 858 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 CHMP6Q96FZ7 201 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 INTS9Q9NV88 658 aaKnown RBP16.51■□□□□ 0.23
MBD1-227ENST00000592060 DDX20Q9UHI6 824 aaKnown RBP16.51■□□□□ 0.23
MBD1-227ENST00000592060 APOC4-APOC2K7ER74 178 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 APOC2P02655 101 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 AXLP30530 894 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 RGS7P49802 495 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 PLCB3Q01970 1234 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 C15orf59Q2T9L4 293 aaPredicted RBP16.51■□□□□ 0.23
MBD1-227ENST00000592060 GLRA4Q5JXX5 417 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 PMF1Q6P1K2 205 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 MICALCLQ6ZW33 695 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 C10orf67Q8IYJ2 551 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 TMEM40Q8WWA1 233 aa16.51■□□□□ 0.23
MBD1-227ENST00000592060 GABBR2O75899 941 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 IFNB1P01574 187 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 CREB1P16220 341 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 PDGFRAP16234 1089 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 FASTKD3Q14CZ7 662 aaKnown RBP16.5■□□□□ 0.23
MBD1-227ENST00000592060 SNX17Q15036 470 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 SOWAHAQ2M3V2 549 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 ARHGAP17Q68EM7 881 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 YTHDF3Q7Z739 585 aaKnown RBP16.5■□□□□ 0.23
MBD1-227ENST00000592060 TMEM110Q86TL2 294 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 UNC93AQ86WB7 457 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 CYP4X1Q8N118 509 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 SLC35F5Q8WV83 523 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 DNAJB3Q8WWF6 145 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 USP6NLQ92738 828 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 KHSRPQ92945 711 aaKnown RBP eCLIP16.5■□□□□ 0.23
MBD1-227ENST00000592060 CFAP57Q96MR6 1250 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 TTC25Q96NG3 672 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 C10orf88Q9H8K7 445 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 RSAD1Q9HA92 442 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 FAM49BQ9NUQ9 324 aa16.5■□□□□ 0.23
MBD1-227ENST00000592060 UBQLN1Q9UMX0 589 aaKnown RBP16.5■□□□□ 0.23
MBD1-227ENST00000592060 A0A087WUV0 522 aaPredicted RBP16.49■□□□□ 0.23
MBD1-227ENST00000592060 IGF2BP3O00425 579 aaKnown RBP eCLIP16.49■□□□□ 0.23
MBD1-227ENST00000592060 CDH16O75309 829 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 MAGEA9P43362 315 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 MMRN1Q13201 1228 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 CCDC14Q49A88 953 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 XKR4Q5GH76 650 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 UBXN11Q5T124 520 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 CYP4F22Q6NT55 531 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 CHADLQ6NUI6 762 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 PHACTR1Q9C0D0 580 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 TRPM7Q96QT4 1865 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 PIRO00625 290 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 ALOX15BO15296 676 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 GRAP2O75791 330 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 AKAP5P24588 427 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 GCAP28676 217 aa16.49■□□□□ 0.23
MBD1-227ENST00000592060 RPL22P35268 128 aaKnown RBP16.49■□□□□ 0.23
MBD1-227ENST00000592060 DPYSL3Q14195 570 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms