RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ADGRF2Q8IZF7 708 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 GLIS3Q8NEA6 775 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 OR5B17Q8NGF7 314 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 RIN3Q8TB24 985 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 KBTBD7Q8WVZ9 684 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 HPDLQ96IR7 371 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 ANKRD36BP1Q96IX9 119 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 SPATA17Q96L03 361 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 C7orf25Q9BPX7 421 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 RTKNQ9BST9 563 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 EBF3Q9H4W6 596 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 GCNT4Q9P109 453 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 CDH9Q9ULB4 789 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 MAGED2Q9UNF1 606 aaPredicted RBP11.14□□□□□ -0.63
VPS4B-207ENST00000591519 ZDHHC9Q9Y397 364 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 OBSL1O75147 1896 aa11.14□□□□□ -0.63
VPS4B-207ENST00000591519 PTPRJQ12913 1337 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 TGFB1I1O43294 461 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 FOXD2O60548 495 aaPredicted RBP11.13□□□□□ -0.63
VPS4B-207ENST00000591519 YEATS4O95619 227 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 CST3P01034 146 aaPredicted RBP11.13□□□□□ -0.63
VPS4B-207ENST00000591519 TNNC2P02585 160 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 USP17L7P0C7H9 530 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 PFKLP17858 780 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 FECHP22830 423 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 WARSP23381 471 aaKnown RBP11.13□□□□□ -0.63
VPS4B-207ENST00000591519 LMO2P25791 158 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 GALK1P51570 392 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 EHHADHQ08426 723 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 SPEM2Q0P670 501 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 MAPRE1Q15691 268 aaKnown RBP11.13□□□□□ -0.63
VPS4B-207ENST00000591519 CSRP2Q16527 193 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 FBXO43Q4G163 708 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 SDHAF4Q5VUM1 108 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 TRIM68Q6AZZ1 485 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 CC2D1AQ6P1N0 951 aaPredicted RBP11.13□□□□□ -0.63
VPS4B-207ENST00000591519 VSTM1Q6UX27 236 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 C4orf50Q6ZRC1 276 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 CBWD2Q8IUF1 395 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 SPATA2LQ8IUW3 424 aaPredicted RBP11.13□□□□□ -0.63
VPS4B-207ENST00000591519 WDR49Q8IV35 697 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 KIAA1958Q8N8K9 716 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 IQUBQ8NA54 791 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 HPS3Q969F9 1004 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 FAM84AQ96KN4 292 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 CYP2S1Q96SQ9 504 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 SLC6A16Q9GZN6 736 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 FBRSL1Q9HCM7 1045 aaKnown RBP11.13□□□□□ -0.63
VPS4B-207ENST00000591519 HSPBP1Q9NZL4 362 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 MAGEC2Q9UBF1 373 aaPredicted RBP11.13□□□□□ -0.63
VPS4B-207ENST00000591519 USP18Q9UMW8 372 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 R3HCC1Q9Y3T6 440 aaKnown RBP11.13□□□□□ -0.63
VPS4B-207ENST00000591519 GREB1Q4ZG55 1949 aa11.13□□□□□ -0.63
VPS4B-207ENST00000591519 ANAPC1Q9H1A4 1944 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 TRAV19A0A0A6YYK7 116 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 HCRTO43612 131 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 CUTAO60888 179 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 ATP2C2O75185 946 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 TACC1O75410 805 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 DRD1P21728 446 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 GJA4P35212 333 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 SRSF5Q13243 272 aaKnown RBP11.12□□□□□ -0.63
VPS4B-207ENST00000591519 MTF1Q14872 753 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 PSMD6Q15008 389 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 ZNF77Q15935 545 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 LPAL2Q16609 132 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 PKN3Q6P5Z2 889 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 SHC4Q6S5L8 630 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 PRR23BQ6ZRT6 265 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 TRAPPC11Q7Z392 1133 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 SCUBE3Q8IX30 993 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 CAMKK1Q8N5S9 505 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 FSIP1Q8NA03 581 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 STKLD1Q8NE28 680 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 OSCP1Q8WVF1 389 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 EXOC4Q96A65 974 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 LOXL4Q96JB6 756 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 SLC22A12Q96S37 553 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 SYT15Q9BQS2 421 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 ECT2Q9H8V3 914 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 CRTAC1Q9NQ79 661 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 AGPAT3Q9NRZ7 376 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 SEMA4GQ9NTN9 838 aa11.12□□□□□ -0.63
VPS4B-207ENST00000591519 CDV3Q9UKY7 258 aaKnown RBP11.12□□□□□ -0.63
VPS4B-207ENST00000591519 PVALEFA0A1B0GWK0 134 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 FAM187AA6NFU0 413 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 TULP1O00294 542 aaPredicted RBP11.11□□□□□ -0.63
VPS4B-207ENST00000591519 SLC30A4O14863 429 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 AKAP3O75969 853 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 STAU1O95793 577 aaKnown RBP11.11□□□□□ -0.63
VPS4B-207ENST00000591519 ARSAP15289 507 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 HDCP19113 662 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 HOXC13P31276 330 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 GNL1P36915 607 aaPredicted RBP11.11□□□□□ -0.63
VPS4B-207ENST00000591519 ME1P48163 572 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 PPP3CCP48454 512 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 USP4Q13107 963 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 SNRNP35Q16560 246 aaKnown RBP11.11□□□□□ -0.63
VPS4B-207ENST00000591519 CCDC142Q17RM4 750 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 FAM26FQ5R3K3 315 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms