RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 TRIM7Q9C029 511 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 CARD9Q9H257 536 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 EPB41L5Q9HCM4 733 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 FAM49BQ9NUQ9 324 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 EHD2Q9NZN4 543 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 MICAL3Q7RTP6 2002 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 PAX3P23760 479 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 GSCP56915 257 aaPredicted RBP20.47■□□□□ 0.87
SPHK1-207ENST00000590959 CYP4A22Q5TCH4 519 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 WSCD1Q658N2 575 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.47■□□□□ 0.871e-7■■■□□ 15.5
SPHK1-207ENST00000590959 IPO4Q8TEX9 1081 aaKnown RBP20.47■□□□□ 0.87
SPHK1-207ENST00000590959 CD101Q93033 1021 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 PAAF1Q9BRP4 392 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 MIS12Q9H081 205 aa20.47■□□□□ 0.87
SPHK1-207ENST00000590959 GOLGA6L10A6NI86 522 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 GABRDO14764 452 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 HCRTO43612 131 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 B3GAT3O94766 335 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 PROSCO94903 275 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 IGFBP6P24592 240 aaPredicted RBP20.46■□□□□ 0.87
SPHK1-207ENST00000590959 GABRB2P47870 512 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 CCT5P48643 541 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 GUCY2DQ02846 1103 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 CNKSR3Q6P9H4 555 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 DCUN1D2Q6PH85 259 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.46■□□□□ 0.87
SPHK1-207ENST00000590959 IL23AQ9NPF7 189 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 TMEM161AQ9NX61 479 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 SMARCAL1Q9NZC9 954 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 IP6K2Q9UHH9 426 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 TTC3P53804 2025 aa20.46■□□□□ 0.87
SPHK1-207ENST00000590959 TMEM191CA6NGB0 347 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 GLI1P08151 1106 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 SETSIPP0DME0 302 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 CTNNA2P26232 953 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 CTNNA1P35221 906 aaKnown RBP20.45■□□□□ 0.86
SPHK1-207ENST00000590959 LHX1P48742 406 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 PSMC1P62191 440 aaKnown RBP20.45■□□□□ 0.86
SPHK1-207ENST00000590959 RPL7AP62424 266 aaKnown RBP20.45■□□□□ 0.86
SPHK1-207ENST00000590959 FPGSQ05932 587 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 MTMR3Q13615 1198 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 ZNF268Q14587 947 aaPredicted RBP20.45■□□□□ 0.86
SPHK1-207ENST00000590959 CLUL1Q15846 466 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 PKDCCQ504Y2 493 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 OTOP2Q7RTS6 562 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 OSTM1Q86WC4 334 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 RASGEF1CQ8N431 466 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 URGCPQ8TCY9 931 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 ELAC1Q9H777 363 aaKnown RBP20.45■□□□□ 0.86
SPHK1-207ENST00000590959 KANSL3Q9P2N6 904 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 FAM169AQ9Y6X4 670 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 PGRMC1O00264 195 aaKnown RBP20.45■□□□□ 0.86
SPHK1-207ENST00000590959 ERBB2P04626 1255 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 PFKMP08237 780 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 PPP2R5EQ16537 467 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 NOMO2Q5JPE7 1267 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 CLLU1OSQ5K130 101 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 PPP1R15BQ5SWA1 713 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 YTHDF3Q7Z739 585 aaKnown RBP20.45■□□□□ 0.86
SPHK1-207ENST00000590959 TTC30AQ86WT1 665 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 XYLT1Q86Y38 959 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 SUGP1Q8IWZ8 645 aaKnown RBP20.45■□□□□ 0.86
SPHK1-207ENST00000590959 B3GALNT2Q8NCR0 500 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 ALG3Q92685 438 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 KRT35Q92764 455 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 ATP6V1G3Q96LB4 118 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 MCEEQ96PE7 176 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.45■□□□□ 0.868e-10■■■□□ 14.6
SPHK1-207ENST00000590959 NFU1Q9UMS0 254 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 PCDHA3Q9Y5H8 950 aa20.45■□□□□ 0.86
SPHK1-207ENST00000590959 GJB6O95452 261 aa20.44■□□□□ 0.86
SPHK1-207ENST00000590959 MAN1A1P33908 653 aa20.44■□□□□ 0.86
SPHK1-207ENST00000590959 CARSP49589 748 aaKnown RBP20.44■□□□□ 0.86
SPHK1-207ENST00000590959 PEX5P50542 639 aa20.44■□□□□ 0.86
SPHK1-207ENST00000590959 RNASE9P60153 205 aaKnown RBP20.44■□□□□ 0.86
SPHK1-207ENST00000590959 IKBKEQ14164 716 aa20.44■□□□□ 0.86
SPHK1-207ENST00000590959 TIGD5Q53EQ6 642 aa20.44■□□□□ 0.86
SPHK1-207ENST00000590959 ZNF365Q70YC5 407 aa20.44■□□□□ 0.86
SPHK1-207ENST00000590959 TMCO2Q7Z6W1 182 aaPredicted RBP20.44■□□□□ 0.86
SPHK1-207ENST00000590959 ANKRD52Q8NB46 1076 aa20.44■□□□□ 0.86
SPHK1-207ENST00000590959 ARL8AQ96BM9 186 aa20.44■□□□□ 0.86
SPHK1-207ENST00000590959 KRT12Q99456 494 aa20.44■□□□□ 0.86
SPHK1-207ENST00000590959 DDX43Q9NXZ2 648 aaKnown RBP20.44■□□□□ 0.86
SPHK1-207ENST00000590959 TJP2Q9UDY2 1190 aa20.44■□□□□ 0.86
SPHK1-207ENST00000590959 TTC7AQ9ULT0 858 aaPredicted RBP20.44■□□□□ 0.86
SPHK1-207ENST00000590959 SIGLEC16A6NMB1 481 aa20.43■□□□□ 0.86
SPHK1-207ENST00000590959 GOLGA8SH3BPF8 625 aa20.43■□□□□ 0.86
SPHK1-207ENST00000590959 ODC1P11926 461 aa20.43■□□□□ 0.86
SPHK1-207ENST00000590959 KRT3P12035 628 aa20.43■□□□□ 0.86
SPHK1-207ENST00000590959 BCAT1P54687 386 aa20.43■□□□□ 0.86
SPHK1-207ENST00000590959 SNX16P57768 344 aa20.43■□□□□ 0.86
SPHK1-207ENST00000590959 SPDYCQ5MJ68 293 aa20.43■□□□□ 0.86
SPHK1-207ENST00000590959 DCAF12L1Q5VU92 463 aa20.43■□□□□ 0.86
SPHK1-207ENST00000590959 DCLRE1AQ6PJP8 1040 aa20.43■□□□□ 0.86
SPHK1-207ENST00000590959 CPNE8Q86YQ8 564 aa20.43■□□□□ 0.86
SPHK1-207ENST00000590959 CRIPAKQ8N1N5 446 aa20.43■□□□□ 0.86
SPHK1-207ENST00000590959 STK32AQ8WU08 396 aa20.43■□□□□ 0.86
SPHK1-207ENST00000590959 SLC35F5Q8WV83 523 aa20.43■□□□□ 0.86
SPHK1-207ENST00000590959 EPN3Q9H201 632 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms