RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 SATB1Q01826 763 aa19.17■□□□□ 0.66
VAT1-208ENST00000590924 SCARA3Q6AZY7 606 aa19.17■□□□□ 0.66
VAT1-208ENST00000590924 ADGRF2Q8IZF7 708 aa19.17■□□□□ 0.66
VAT1-208ENST00000590924 TOP6BLQ8N6T0 577 aa19.17■□□□□ 0.66
VAT1-208ENST00000590924 GPR161Q8N6U8 529 aaKnown RBP19.17■□□□□ 0.66
VAT1-208ENST00000590924 ENOX1Q8TC92 643 aaKnown RBP19.17■□□□□ 0.66
VAT1-208ENST00000590924 ANKRD36BP1Q96IX9 119 aa19.17■□□□□ 0.66
VAT1-208ENST00000590924 FAM84AQ96KN4 292 aa19.17■□□□□ 0.66
VAT1-208ENST00000590924 CGRRF1Q99675 332 aa19.17■□□□□ 0.66
VAT1-208ENST00000590924 FUCA2Q9BTY2 467 aa19.17■□□□□ 0.66
VAT1-208ENST00000590924 SRRTQ9BXP5 876 aaKnown RBP19.17■□□□□ 0.66
VAT1-208ENST00000590924 NAT10Q9H0A0 1025 aaKnown RBP19.17■□□□□ 0.66
VAT1-208ENST00000590924 KIF9Q9HAQ2 790 aa19.17■□□□□ 0.66
VAT1-208ENST00000590924 RBM12Q9NTZ6 932 aaKnown RBP19.17■□□□□ 0.66
VAT1-208ENST00000590924 THG1LQ9NWX6 298 aaKnown RBP19.17■□□□□ 0.66
VAT1-208ENST00000590924 SNX9Q9Y5X1 595 aa19.17■□□□□ 0.66
VAT1-208ENST00000590924 TULP1O00294 542 aaPredicted RBP19.16■□□□□ 0.66
VAT1-208ENST00000590924 CAVIN2O95810 425 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 TNNI1P19237 187 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 ACAT1P24752 427 aaKnown RBP19.16■□□□□ 0.66
VAT1-208ENST00000590924 PCSK1P29120 753 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 AVPR1AP37288 418 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 LHX1P48742 406 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 GPR15P49685 360 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 VAMP7P51809 220 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 MARSP56192 900 aaKnown RBP19.16■□□□□ 0.66
VAT1-208ENST00000590924 RPL10AP62906 217 aaKnown RBP19.16■□□□□ 0.66
VAT1-208ENST00000590924 TNK2Q07912 1038 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 CCINQ13939 588 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 PUM1Q14671 1186 aaKnown RBP eCLIP19.16■□□□□ 0.66
VAT1-208ENST00000590924 ITPRIPL2Q3MIP1 535 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 ZSCAN23Q3MJ62 389 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 DPH6Q7L8W6 267 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 MAB21L3Q8N8X9 362 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 CCDC127Q96BQ5 260 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 TRMT2BQ96GJ1 504 aaKnown RBP19.16■□□□□ 0.66
VAT1-208ENST00000590924 SMG9Q9H0W8 520 aaKnown RBP19.16■□□□□ 0.66
VAT1-208ENST00000590924 GZF1Q9H116 711 aaPredicted RBP19.16■□□□□ 0.66
VAT1-208ENST00000590924 UXTQ9UBK9 157 aaPredicted RBP19.16■□□□□ 0.66
VAT1-208ENST00000590924 PTPRJQ12913 1337 aa19.16■□□□□ 0.66
VAT1-208ENST00000590924 SYCE3A1L190 88 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 STX10O60499 249 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 NOL4O94818 638 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 TNNC2P02585 160 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 DLATP10515 647 aaKnown RBP19.15■□□□□ 0.66
VAT1-208ENST00000590924 CYP2F1P24903 491 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 GTF2H1P32780 548 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 PON2Q15165 354 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 TPD52L1Q16890 204 aaPredicted RBP19.15■□□□□ 0.66
VAT1-208ENST00000590924 SOWAHAQ2M3V2 549 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 CFAP221Q4G0U5 840 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 LMBRD2Q68DH5 695 aaPredicted RBP19.15■□□□□ 0.66
VAT1-208ENST00000590924 Q6ZS52 159 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 OSTM1Q86WC4 334 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 SYNPOQ8N3V7 929 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 STKLD1Q8NE28 680 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 TTC8Q8TAM2 541 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 PLEKHO2Q8TD55 490 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 MRPS31Q92665 395 aaKnown RBP19.15■□□□□ 0.66
VAT1-208ENST00000590924 USP13Q92995 863 aaPredicted RBP19.15■□□□□ 0.66
VAT1-208ENST00000590924 FUBP3Q96I24 572 aaKnown RBP eCLIP19.15■□□□□ 0.66
VAT1-208ENST00000590924 FAM83CQ9BQN1 747 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 BPIFA3Q9BQP9 254 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 THAP9Q9H5L6 903 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 TDP1Q9NUW8 608 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 DLL3Q9NYJ7 618 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 ARMCX3Q9UH62 379 aaPredicted RBP19.15■□□□□ 0.66
VAT1-208ENST00000590924 GTF3C4Q9UKN8 822 aa19.15■□□□□ 0.66
VAT1-208ENST00000590924 MAGED2Q9UNF1 606 aaPredicted RBP19.15■□□□□ 0.66
VAT1-208ENST00000590924 LRRIQ3A6PVS8 624 aaPredicted RBP19.14■□□□□ 0.65
VAT1-208ENST00000590924 TADA3O75528 432 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 MYO1EQ12965 1108 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 ZNF268Q14587 947 aaPredicted RBP19.14■□□□□ 0.65
VAT1-208ENST00000590924 DDR2Q16832 855 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 SDHAF4Q5VUM1 108 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 TXNDC8Q6A555 127 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 LIMS2Q7Z4I7 341 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 MON1AQ86VX9 555 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 OR5B17Q8NGF7 314 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 ZNF516Q92618 1163 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 EEF2KMTQ96G04 330 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 MYRFLQ96LU7 910 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 GKN1Q9NS71 199 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 GMEB2Q9UKD1 530 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 CCL26Q9Y258 94 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 R3HCC1Q9Y3T6 440 aaKnown RBP19.14■□□□□ 0.65
VAT1-208ENST00000590924 SDK1Q7Z5N4 2213 aa19.14■□□□□ 0.65
VAT1-208ENST00000590924 K7ESF4 209 aa19.13■□□□□ 0.65
VAT1-208ENST00000590924 RUNX3Q13761 415 aa19.13■□□□□ 0.65
VAT1-208ENST00000590924 CCDC142Q17RM4 750 aa19.13■□□□□ 0.65
VAT1-208ENST00000590924 CCDC40Q4G0X9 1142 aa19.13■□□□□ 0.65
VAT1-208ENST00000590924 LAIR1Q6GTX8 287 aa19.13■□□□□ 0.65
VAT1-208ENST00000590924 FAM171BQ6P995 826 aa19.13■□□□□ 0.65
VAT1-208ENST00000590924 C11orf57Q6ZUT1 292 aaPredicted RBP19.13■□□□□ 0.65
VAT1-208ENST00000590924 TRAPPC11Q7Z392 1133 aa19.13■□□□□ 0.65
VAT1-208ENST00000590924 DGLUCYQ7Z3D6 616 aa19.13■□□□□ 0.65
VAT1-208ENST00000590924 SPATA2LQ8IUW3 424 aaPredicted RBP19.13■□□□□ 0.65
VAT1-208ENST00000590924 FAM114A1Q8IWE2 563 aa19.13■□□□□ 0.65
VAT1-208ENST00000590924 HPDLQ96IR7 371 aa19.13■□□□□ 0.65
VAT1-208ENST00000590924 HPS4Q9NQG7 708 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms