RNA–Protein interactions for RNA: ENST00000590530.5

GCDH-212, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-212ENST00000590530 SPOUT1Q5T280 376 aaKnown RBP17.88■□□□□ 0.45
GCDH-212ENST00000590530 DCAF12L1Q5VU92 463 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 KCNT2Q6UVM3 1135 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 ANKRD52Q8NB46 1076 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 MYLPFQ96A32 169 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 ACBD6Q9BR61 282 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 HTATIP2Q9BUP3 242 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 PARD6BQ9BYG5 372 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 EPC1Q9H2F5 836 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 RNF216Q9NWF9 866 aaPredicted RBP17.88■□□□□ 0.45
GCDH-212ENST00000590530 TMEM59LQ9UK28 342 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 DSEQ9UL01 958 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 E5RJQ4 531 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 MYO1FO00160 1098 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 SPOPO43791 374 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 PROSCO94903 275 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 OAZ2O95190 189 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 GJB5O95377 273 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 EFEMP2O95967 443 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 FGFR3P22607 806 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 CCDC70Q6NSX1 233 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 FAM171BQ6P995 826 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 MTERF4Q7Z6M4 381 aaKnown RBP17.88■□□□□ 0.45
GCDH-212ENST00000590530 C3orf20Q8ND61 904 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 MYCBPAPQ8TBZ2 947 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 RUBCNQ92622 972 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 ALG3Q92685 438 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 IGSF21Q96ID5 467 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 KCNK16Q96T55 309 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 MED10Q9BTT4 135 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 RBM12Q9NTZ6 932 aaKnown RBP17.88■□□□□ 0.45
GCDH-212ENST00000590530 LAMA3Q16787 3333 aa17.88■□□□□ 0.45
GCDH-212ENST00000590530 LCHNA4D1U4 455 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 GOLGA8SH3BPF8 625 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 RHOXF2BP0C7M4 288 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 LINC00271P0C7V0 271 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 PCSK1P29120 753 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 PEX5P50542 639 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 RPL7AP62424 266 aaKnown RBP17.87■□□□□ 0.45
GCDH-212ENST00000590530 MRPL58Q14197 206 aaKnown RBP17.87■□□□□ 0.45
GCDH-212ENST00000590530 DAB2IPQ5VWQ8 1189 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 DNAJC24Q6P3W2 148 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 PRSS55Q6UWB4 352 aaPredicted RBP17.87■□□□□ 0.45
GCDH-212ENST00000590530 FAM35AQ86V20 835 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 XYLT1Q86Y38 959 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 FEZF2Q8TBJ5 459 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 SMOQ99835 787 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 RHOXF2Q9BQY4 288 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 DNAI2Q9GZS0 605 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 KRT82Q9NSB4 513 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 HESX1Q9UBX0 185 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 PCDHA3Q9Y5H8 950 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 VWA8A3KMH1 1905 aa17.87■□□□□ 0.45
GCDH-212ENST00000590530 TRAPPC3O43617 180 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 PAX3P23760 479 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 BRD3Q15059 726 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 PPP1R15BQ5SWA1 713 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 C9orf50Q5SZB4 431 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 WDR93Q6P2C0 686 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 CLEC20AQ6ZU45 233 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 SPRED2Q7Z698 418 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 CMTR2Q8IYT2 770 aaKnown RBP17.86■□□□□ 0.45
GCDH-212ENST00000590530 ZMIZ2Q8NF64 920 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 CLEC4CQ8WTT0 213 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 HERVK_113Q902F9 699 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 NDRG1Q92597 394 aaKnown RBP17.86■□□□□ 0.45
GCDH-212ENST00000590530 KRT35Q92764 455 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 RNPC3Q96LT9 517 aaKnown RBP17.86■□□□□ 0.45
GCDH-212ENST00000590530 PNKPQ96T60 521 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 DUSP16Q9BY84 665 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 WDR35Q9P2L0 1181 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 SF3B1O75533 1304 aaKnown RBP eCLIP17.86■□□□□ 0.453e-6■■■■■ 137.9
GCDH-212ENST00000590530 CCDC151A5D8V7 595 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 SYN3O14994 580 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 BDNFP23560 247 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 MAP3K7CLP57077 242 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 HTRA4P83105 476 aaPredicted RBP17.86■□□□□ 0.45
GCDH-212ENST00000590530 RBM10P98175 930 aaKnown RBP17.86■□□□□ 0.45
GCDH-212ENST00000590530 BST2Q10589 180 aaKnown RBP17.86■□□□□ 0.45
GCDH-212ENST00000590530 TAF5Q15542 800 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 GLE1Q53GS7 698 aaKnown RBP17.86■□□□□ 0.45
GCDH-212ENST00000590530 PSRC1Q6PGN9 363 aaPredicted RBP17.86■□□□□ 0.45
GCDH-212ENST00000590530 SCUBE3Q8IX30 993 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 THEM5Q8N1Q8 247 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 SLC39A11Q8N1S5 342 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 COLGALT1Q8NBJ5 622 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 JOSD2Q8TAC2 188 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.86■□□□□ 0.45
GCDH-212ENST00000590530 C18orf8Q96DM3 657 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 NAP1L3Q99457 506 aaPredicted RBP17.86■□□□□ 0.45
GCDH-212ENST00000590530 SLC4A5Q9BY07 1137 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 IP6K2Q9UHH9 426 aa17.86■□□□□ 0.45
GCDH-212ENST00000590530 TMEM191CA6NGB0 347 aa17.85■□□□□ 0.45
GCDH-212ENST00000590530 CCDC188H7C350 402 aa17.85■□□□□ 0.45
GCDH-212ENST00000590530 ADAM12O43184 909 aa17.85■□□□□ 0.45
GCDH-212ENST00000590530 SETSIPP0DME0 302 aa17.85■□□□□ 0.45
GCDH-212ENST00000590530 RPL17P18621 184 aaKnown RBP17.85■□□□□ 0.45
GCDH-212ENST00000590530 MCM3P25205 808 aa17.85■□□□□ 0.45
GCDH-212ENST00000590530 GABRB2P47870 512 aa17.85■□□□□ 0.45
GCDH-212ENST00000590530 MARCKSL1P49006 195 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms