RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 LMAN1LQ9HAT1 526 aa21.91■■□□□ 1.1
CIRBP-226ENST00000590171 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.91■■□□□ 1.14e-7■■■■■ 57
CIRBP-226ENST00000590171 GCNT4Q9P109 453 aa21.91■■□□□ 1.1
CIRBP-226ENST00000590171 HMGXB4Q9UGU5 601 aa21.91■■□□□ 1.1
CIRBP-226ENST00000590171 FBXO4Q9UKT5 387 aa21.91■■□□□ 1.1
CIRBP-226ENST00000590171 PCDHA5Q9Y5H7 936 aa21.91■■□□□ 1.1
CIRBP-226ENST00000590171 KIF26AQ9ULI4 1882 aaPredicted RBP21.91■■□□□ 1.1
CIRBP-226ENST00000590171 TRAV19A0A0A6YYK7 116 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 CKMP06732 381 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 USP17L7P0C7H9 530 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 CHRNB1P11230 501 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 MTAPQ13126 283 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 COBLL1Q53SF7 1204 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 WDR44Q5JSH3 913 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 TRIM68Q6AZZ1 485 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 C1orf228Q6PIY5 440 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 PAQR9Q6ZVX9 377 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 FAM35AQ86V20 835 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 ARL14EPQ8N8R7 260 aaPredicted RBP21.9■■□□□ 1.1
CIRBP-226ENST00000590171 TNIP3Q96KP6 325 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 MMRN2Q9H8L6 949 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 HPS4Q9NQG7 708 aa21.9■■□□□ 1.1
CIRBP-226ENST00000590171 USP34Q70CQ2 3546 aa21.89■■□□□ 1.09
CIRBP-226ENST00000590171 SMC2O95347 1197 aa21.89■■□□□ 1.09
CIRBP-226ENST00000590171 NDST1P52848 882 aa21.89■■□□□ 1.09
CIRBP-226ENST00000590171 MCCD1P59942 119 aaPredicted RBP21.89■■□□□ 1.09
CIRBP-226ENST00000590171 CSTF1Q05048 431 aaKnown RBP21.89■■□□□ 1.09
CIRBP-226ENST00000590171 ORC1Q13415 861 aa21.89■■□□□ 1.09
CIRBP-226ENST00000590171 ZNF77Q15935 545 aa21.89■■□□□ 1.09
CIRBP-226ENST00000590171 ITPRIPL2Q3MIP1 535 aa21.89■■□□□ 1.09
CIRBP-226ENST00000590171 ACOT1Q86TX2 421 aa21.89■■□□□ 1.09
CIRBP-226ENST00000590171 SMARCE1Q969G3 411 aa21.89■■□□□ 1.09
CIRBP-226ENST00000590171 APOBEC3GQ9HC16 384 aaKnown RBP21.89■■□□□ 1.09
CIRBP-226ENST00000590171 TMEM8AQ9HCN3 771 aa21.89■■□□□ 1.09
CIRBP-226ENST00000590171 EHD2Q9NZN4 543 aa21.89■■□□□ 1.09
CIRBP-226ENST00000590171 TRPM5Q9NZQ8 1165 aa21.89■■□□□ 1.09
CIRBP-226ENST00000590171 DMDP11532 3685 aa21.88■■□□□ 1.09
CIRBP-226ENST00000590171 USP4Q13107 963 aa21.88■■□□□ 1.09
CIRBP-226ENST00000590171 RUNX3Q13761 415 aa21.88■■□□□ 1.09
CIRBP-226ENST00000590171 MTF1Q14872 753 aa21.88■■□□□ 1.09
CIRBP-226ENST00000590171 ZNF528Q3MIS6 628 aa21.88■■□□□ 1.09
CIRBP-226ENST00000590171 FUKQ8N0W3 1084 aa21.88■■□□□ 1.09
CIRBP-226ENST00000590171 KCNK16Q96T55 309 aa21.88■■□□□ 1.09
CIRBP-226ENST00000590171 MED10Q9BTT4 135 aa21.88■■□□□ 1.09
CIRBP-226ENST00000590171 IMPG2Q9BZV3 1241 aa21.88■■□□□ 1.09
CIRBP-226ENST00000590171 EBF3Q9H4W6 596 aa21.88■■□□□ 1.09
CIRBP-226ENST00000590171 PRMT8Q9NR22 394 aaPredicted RBP21.88■■□□□ 1.09
CIRBP-226ENST00000590171 RBM12Q9NTZ6 932 aaKnown RBP21.88■■□□□ 1.09
CIRBP-226ENST00000590171 GREB1Q4ZG55 1949 aa21.88■■□□□ 1.09
CIRBP-226ENST00000590171 ATP8B3O60423 1300 aa21.87■■□□□ 1.09
CIRBP-226ENST00000590171 ZNF840PA6NDX5 716 aa21.87■■□□□ 1.09
CIRBP-226ENST00000590171 OTOL1A6NHN0 477 aaPredicted RBP21.87■■□□□ 1.09
CIRBP-226ENST00000590171 CETN3O15182 167 aa21.87■■□□□ 1.09
CIRBP-226ENST00000590171 CCDC130P13994 396 aa21.87■■□□□ 1.09
CIRBP-226ENST00000590171 ARSAP15289 507 aa21.87■■□□□ 1.09
CIRBP-226ENST00000590171 HDCP19113 662 aa21.87■■□□□ 1.09
CIRBP-226ENST00000590171 PMS1P54277 932 aaKnown RBP21.87■■□□□ 1.09
CIRBP-226ENST00000590171 IFRD2Q12894 506 aaPredicted RBP21.87■■□□□ 1.09
CIRBP-226ENST00000590171 TAF10Q12962 218 aa21.87■■□□□ 1.09
CIRBP-226ENST00000590171 PON2Q15165 354 aa21.87■■□□□ 1.09
CIRBP-226ENST00000590171 CC2D1AQ6P1N0 951 aaPredicted RBP21.87■■□□□ 1.09
CIRBP-226ENST00000590171 ZC3H14Q6PJT7 736 aaKnown RBP21.87■■□□□ 1.09
CIRBP-226ENST00000590171 TSSK4Q6SA08 328 aa21.87■■□□□ 1.09
CIRBP-226ENST00000590171 UNC93AQ86WB7 457 aa21.87■■□□□ 1.09
CIRBP-226ENST00000590171 CRYBG2Q8N1P7 616 aa21.87■■□□□ 1.09
CIRBP-226ENST00000590171 TTC16Q8NEE8 873 aa21.87■■□□□ 1.09
CIRBP-226ENST00000590171 IER2Q9BTL4 223 aa21.87■■□□□ 1.09
CIRBP-226ENST00000590171 HOOK1Q9UJC3 728 aaKnown RBP21.87■■□□□ 1.09
CIRBP-226ENST00000590171 EPB41P11171 864 aaKnown RBP21.86■■□□□ 1.09
CIRBP-226ENST00000590171 GTF2H1P32780 548 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 INCA1Q0VD86 236 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 LRRC32Q14392 662 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 GAS6Q14393 721 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 KRT39Q6A163 491 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 ANKRD40Q6AI12 368 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 ZC3H3Q8IXZ2 948 aaKnown RBP21.86■■□□□ 1.09
CIRBP-226ENST00000590171 ADSSL1Q8N142 457 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 NUP93Q8N1F7 819 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 SH3RF2Q8TEC5 729 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 CHFRQ96EP1 664 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 SMARCD1Q96GM5 515 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 TWNKQ96RR1 684 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 NIF3L1Q9GZT8 377 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 DMAP1Q9NPF5 467 aaPredicted RBP21.86■■□□□ 1.09
CIRBP-226ENST00000590171 KRT82Q9NSB4 513 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 FAM49BQ9NUQ9 324 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 ARHGAP26Q9UNA1 814 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 F5P12259 2224 aa21.86■■□□□ 1.09
CIRBP-226ENST00000590171 ZFHX2Q9C0A1 2572 aaPredicted RBP21.85■■□□□ 1.09
CIRBP-226ENST00000590171 TRIM49BA6NDI0 452 aa21.85■■□□□ 1.09
CIRBP-226ENST00000590171 GADD45BO75293 160 aaPredicted RBP21.85■■□□□ 1.09
CIRBP-226ENST00000590171 AP1G2O75843 785 aa21.85■■□□□ 1.09
CIRBP-226ENST00000590171 TCF3P15923 654 aa21.85■■□□□ 1.09
CIRBP-226ENST00000590171 PFKLP17858 780 aa21.85■■□□□ 1.09
CIRBP-226ENST00000590171 PPP3CCP48454 512 aa21.85■■□□□ 1.09
CIRBP-226ENST00000590171 MXI1P50539 228 aa21.85■■□□□ 1.09
CIRBP-226ENST00000590171 PDE6CP51160 858 aa21.85■■□□□ 1.09
CIRBP-226ENST00000590171 ZXDBP98169 803 aa21.85■■□□□ 1.09
CIRBP-226ENST00000590171 PDGFRLQ15198 375 aa21.85■■□□□ 1.09
CIRBP-226ENST00000590171 MAMSTRQ6ZN01 415 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms