RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 LIASO43766 372 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 AGTP01019 485 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 KRT3P12035 628 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 ATF7P17544 494 aaPredicted RBP10.47□□□□□ -0.73
VPS25-202ENST00000589219 MDH1P40925 334 aaKnown RBP10.47□□□□□ -0.73
VPS25-202ENST00000589219 YARSP54577 528 aaKnown RBP10.47□□□□□ -0.73
VPS25-202ENST00000589219 PSMC1P62191 440 aaKnown RBP10.47□□□□□ -0.73
VPS25-202ENST00000589219 BEX3Q00994 111 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 OGDHQ02218 1023 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 PDCLQ13371 301 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 SNX1Q13596 522 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 BYSLQ13895 437 aaKnown RBP10.47□□□□□ -0.73
VPS25-202ENST00000589219 TFDP3Q5H9I0 405 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 ZFYVE27Q5T4F4 411 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 C6orf118Q5T5N4 469 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 SCARA3Q6AZY7 606 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 NOTUMQ6P988 496 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 CATSPER4Q7RTX7 472 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 XYLT1Q86Y38 959 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 FAM126BQ8IXS8 530 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 WDTC1Q8N5D0 677 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 TTC13Q8NBP0 860 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 BEST2Q8NFU1 509 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 ATG4AQ8WYN0 398 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 MCRS1Q96EZ8 462 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 PPP1R16BQ96T49 567 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 HERPUD2Q9BSE4 406 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 KATNAL1Q9BW62 490 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 ROPN1BQ9BZX4 212 aaPredicted RBP10.47□□□□□ -0.73
VPS25-202ENST00000589219 FAM107BQ9H098 131 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 ADAMTS10Q9H324 1103 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 CENPHQ9H3R5 247 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 ROPN1Q9HAT0 212 aaPredicted RBP10.47□□□□□ -0.73
VPS25-202ENST00000589219 AGAP1Q9UPQ3 857 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 NEU2Q9Y3R4 380 aa10.47□□□□□ -0.73
VPS25-202ENST00000589219 UNC80Q8N2C7 3258 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 LRRD1A4D1F6 860 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 GOLGA8SH3BPF8 625 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 XPOTO43592 962 aaKnown RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 GJB6O95452 261 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 NPTXRO95502 500 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 SMIM10L2AP0DMW4 78 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 SMIM10L2BP0DMW5 78 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 DESP17661 470 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 ATP5DP30049 168 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 LSP1P33241 339 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 RDXP35241 583 aaKnown RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 CPT1AP50416 773 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 ATP1A2P50993 1020 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 ITGA8P53708 1063 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 SNX16P57768 344 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 IRX5P78411 483 aaPredicted RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 SLC25A11Q02978 314 aaKnown RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 ITGA7Q13683 1181 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 MFSD10Q14728 455 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 DNAJC21Q5F1R6 531 aaKnown RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 CYP4A22Q5TCH4 519 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 PSRC1Q6PGN9 363 aaPredicted RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 LCLAT1Q6UWP7 414 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 CXCL17Q6UXB2 119 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 MFSD7Q6UXD7 560 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 SPATS2Q86XZ4 545 aaKnown RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 RELL1Q8IUW5 271 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 SLC43A3Q8NBI5 491 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 NKD2Q969F2 451 aaPredicted RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 RNF25Q96BH1 459 aaPredicted RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 ZNF560Q96MR9 790 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 TWNKQ96RR1 684 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 CPXM1Q96SM3 734 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 CDX2Q99626 313 aaPredicted RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 NCAPGQ9BPX3 1015 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 NT5C1AQ9BXI3 368 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 PHACTR1Q9C0D0 580 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 MTIF3Q9H2K0 278 aaKnown RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 METTL5Q9NRN9 209 aaKnown RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 CNTN3Q9P232 1028 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 HMGXB4Q9UGU5 601 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 SLC12A6Q9UHW9 1150 aa10.46□□□□□ -0.73
VPS25-202ENST00000589219 DRG1Q9Y295 367 aaKnown RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 R3HDM2Q9Y2K5 976 aaKnown RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 ATXN2Q99700 1313 aaKnown RBP10.46□□□□□ -0.73
VPS25-202ENST00000589219 F8VP50 259 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 DNALI1O14645 258 aaPredicted RBP10.45□□□□□ -0.74
VPS25-202ENST00000589219 RGS16O15492 202 aaPredicted RBP10.45□□□□□ -0.74
VPS25-202ENST00000589219 GPR32O75388 356 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 LRCH4O75427 683 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 CD4P01730 458 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 ERBB2P04626 1255 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 ITGAVP06756 1048 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 ABHD2P08910 425 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 CYP2C9P11712 490 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 DARSP14868 501 aaKnown RBP10.45□□□□□ -0.74
VPS25-202ENST00000589219 FGFR4P22455 802 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 IVDP26440 423 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 KLRC2P26717 231 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 HPDP32754 393 aaPredicted RBP10.45□□□□□ -0.74
VPS25-202ENST00000589219 PCK1P35558 622 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 ADCY8P40145 1251 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 CDKN2BP42772 138 aa10.45□□□□□ -0.74
VPS25-202ENST00000589219 PSEN2P49810 448 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 267.4 ms