RNA–Protein interactions for RNA: ENST00000588548.1

AP000547.3-204, humanhuman

BASIC

Gene AP000547.3, Length 2,523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000547.3-204ENST00000588548 SAMD11Q96NU1 681 aa6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 ERGIC2Q96RQ1 377 aa6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 CDK5RAP1Q96SZ6 601 aaKnown RBP6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 SECISBP2Q96T21 854 aaKnown RBP6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 YME1L1Q96TA2 773 aa6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 TBCBQ99426 244 aa6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 ZNF717Q9BY31 904 aaPredicted RBP6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 HIPK3Q9H422 1215 aa6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 ATP13A2Q9NQ11 1180 aa6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 RIC8BQ9NVN3 520 aa6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 ZC3H7BQ9UGR2 993 aaKnown RBP6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 DAPK2Q9UIK4 370 aa6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 MKL2Q9ULH7 1088 aa6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 RAB26Q9ULW5 256 aa6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 CORINQ9Y5Q5 1042 aa6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 ADAMTSL3P82987 1691 aa6.75□□□□□ -1.33
AP000547.3-204ENST00000588548 SOS2Q07890 1332 aaPredicted RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 RGPD1P0DJD0 1748 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 DDX60Q8IY21 1712 aaKnown RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 SLIT1O75093 1534 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 TRAV6A0A075B6T7 132 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 TYW5A2RUC4 315 aaKnown RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 WDR91A4D1P6 747 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 ATP6V1G2-DDX39BF2Z307 99 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 PSMD12O00232 456 aaPredicted RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 AREL1O15033 823 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 SRGAP2CP0DJJ0 459 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 ALAS2P22557 587 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 PSMC2P35998 433 aaKnown RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 PHKA1P46020 1223 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 PLTPP55058 493 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 WDR4P57081 412 aaKnown RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 EVA1CP58658 441 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 IRX4P78413 519 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 GALK2Q01415 458 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 SLC15A2Q16348 729 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 SLC9C1Q4G0N8 1177 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 PPM1LQ5SGD2 360 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 CCNJQ5T5M9 372 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 KYAT3Q6YP21 454 aaKnown RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 USP49Q70CQ1 688 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 AMIGO2Q86SJ2 522 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 FBXL6Q8N531 539 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 POU5F2Q8N7G0 328 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 WASF1Q92558 559 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 TTC17Q96AE7 1141 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 VPS33AQ96AX1 596 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 C12orf43Q96C57 262 aaKnown RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 ISOC1Q96CN7 298 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 RBM14Q96PK6 669 aaKnown RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 GCNAQ96QF7 691 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 ALPK1Q96QP1 1244 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 TARS2Q9BW92 718 aaKnown RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 TRIM31Q9BZY9 425 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 ATP13A3Q9H7F0 1226 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 SLCO1B3Q9NPD5 702 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 CD93Q9NPY3 652 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 SIRT5Q9NXA8 310 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 KANSL3Q9P2N6 904 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 BCAP29Q9UHQ4 241 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 APPL1Q9UKG1 709 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 SOX13Q9UN79 622 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 PLA2G4CQ9UP65 541 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 SRPRBQ9Y5M8 271 aaKnown RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 GJA3Q9Y6H8 435 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 PFASO15067 1338 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 FAM208AQ9UK61 1670 aaKnown RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 NALCNQ8IZF0 1738 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 MED1Q15648 1581 aaPredicted RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 A0A087X0B3 334 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 TEX51A0A1B0GUA7 166 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 MYOCOSA0A1B0GUC4 107 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 SSU72P8A0A1W2PR75 194 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 EXTL3O43909 919 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 TOMM70O94826 608 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 HSPA1LP34931 641 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 NKX2-5P52952 324 aaPredicted RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 SNTA1Q13424 505 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 TFDP1Q14186 410 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 SQLEQ14534 574 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 POU6F1Q14863 301 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 CLUL1Q15846 466 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 EXOC3L4Q17RC7 722 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 ZNF568Q3ZCX4 644 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 C6orf10Q5SRN2 563 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 ATAD3BQ5T9A4 648 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 OGFRL1Q5TC84 451 aaPredicted RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 ZNF658Q5TYW1 1059 aaPredicted RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 METTL11BQ5VVY1 283 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 FAM91A1Q658Y4 838 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 APOA5Q6Q788 366 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 ISLR2Q6UXK2 745 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 UNC5DQ6UXZ4 953 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 ZNF704Q6ZNC4 412 aaPredicted RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 IGFN1Q86VF2 1251 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 TMPRSS6Q8IU80 811 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 SLC15A4Q8N697 577 aa6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 ASCC1Q8N9N2 400 aaKnown RBP6.74□□□□□ -1.33
AP000547.3-204ENST00000588548 CDC26Q8NHZ8 85 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms