RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 FUT10Q6P4F1 479 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 VSTM1Q6UX27 236 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 XYLT1Q86Y38 959 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 C3orf58Q8NDZ4 430 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 ACTRT1Q8TDG2 376 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 SLC35F5Q8WV83 523 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 MCRS1Q96EZ8 462 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 CAPZA3Q96KX2 299 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 RUNDC3BQ96NL0 473 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 ZBED2Q9BTP6 218 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 ABCB6Q9NP58 842 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 STAP1Q9ULZ2 295 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 COG5Q9UP83 839 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 RWDD3Q9Y3V2 267 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 PCDHB12Q9Y5F1 795 aa13.34□□□□□ -0.27
TMED1-204ENST00000588289 DNAH12Q6ZR08 3092 aa13.33□□□□□ -0.27
TMED1-204ENST00000588289 TRIM43BA6NCK2 446 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 E5RJQ4 531 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 CEP104O60308 925 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 CFHP08603 1231 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 GPD1P21695 349 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 DNA2P51530 1060 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 WDR5P61964 334 aaKnown RBP13.33□□□□□ -0.28
TMED1-204ENST00000588289 KRT17Q04695 432 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 PKDCCQ504Y2 493 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 FAM171A1Q5VUB5 890 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 FAM171BQ6P995 826 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 POLNQ7Z5Q5 900 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 OSTM1Q86WC4 334 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 CEP57Q86XR8 500 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 WDTC1Q8N5D0 677 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 SPPL2BQ8TCT7 592 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 TRIM43Q96BQ3 446 aaPredicted RBP13.33□□□□□ -0.28
TMED1-204ENST00000588289 CEP295NLQ96MC4 621 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 SLC9A7Q96T83 725 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.33□□□□□ -0.28
TMED1-204ENST00000588289 PAAF1Q9BRP4 392 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 CNPY3Q9BT09 278 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 TTPALQ9BTX7 342 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 CNGB3Q9NQW8 809 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 METTL5Q9NRN9 209 aaKnown RBP13.33□□□□□ -0.28
TMED1-204ENST00000588289 HOMER3Q9NSC5 361 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 PCDHB5Q9Y5E4 795 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 PCDHA3Q9Y5H8 950 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 TIMM13Q9Y5L4 95 aaPredicted RBP13.33□□□□□ -0.28
TMED1-204ENST00000588289 MYO16Q9Y6X6 1858 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 VWA8A3KMH1 1905 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 ALPK3Q96L96 1907 aa13.33□□□□□ -0.28
TMED1-204ENST00000588289 NLRC5Q86WI3 1866 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 DYNC1I1O14576 645 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 CAPN9O14815 690 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 NCK2O43639 380 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 GALTP07902 379 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 LCP1P13796 627 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 CPB1P15086 417 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 SLC11A1P49279 550 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 RGS7P49802 495 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 ZNF143P52747 638 aaPredicted RBP13.32□□□□□ -0.28
TMED1-204ENST00000588289 COPS2P61201 443 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 GLE1Q53GS7 698 aaKnown RBP13.32□□□□□ -0.28
TMED1-204ENST00000588289 VARS2Q5ST30 1063 aaKnown RBP13.32□□□□□ -0.28
TMED1-204ENST00000588289 PMF1Q6P1K2 205 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 FAM183BPQ6ZVS7 135 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 SLC26A9Q7LBE3 791 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 TTC30AQ86WT1 665 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 DNAAF5Q86Y56 855 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 MAP7D3Q8IWC1 876 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 FUKQ8N0W3 1084 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 ARHGAP18Q8N392 663 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 IRGQQ8WZA9 623 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 RUBCNQ92622 972 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 RABGGTAQ92696 567 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 MYLPFQ96A32 169 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 FAM149B1Q96BN6 582 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 PCED1BQ96HM7 432 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 FBXO44Q9H4M3 255 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 DNAJB4Q9UDY4 337 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 TTC7AQ9ULT0 858 aaPredicted RBP13.32□□□□□ -0.28
TMED1-204ENST00000588289 USTQ9Y2C2 406 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 INSL6Q9Y581 213 aa13.32□□□□□ -0.28
TMED1-204ENST00000588289 DPYSL4O14531 572 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 PRPSAP2O60256 369 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 PDGFRAP16234 1089 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 EN2P19622 333 aaPredicted RBP13.31□□□□□ -0.28
TMED1-204ENST00000588289 FGFR3P22607 806 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 PCK1P35558 622 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 RPL34P49207 117 aaKnown RBP13.31□□□□□ -0.28
TMED1-204ENST00000588289 SLC39A12Q504Y0 691 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 PPP1R15BQ5SWA1 713 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 TEX35Q5T0J7 233 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.31□□□□□ -0.28
TMED1-204ENST00000588289 CLEC20AQ6ZU45 233 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 SND1Q7KZF4 910 aaKnown RBP eCLIP13.31□□□□□ -0.281e-6■■■■□ 23.4
TMED1-204ENST00000588289 ZNF572Q7Z3I7 529 aaPredicted RBP13.31□□□□□ -0.28
TMED1-204ENST00000588289 PIGZQ86VD9 579 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 CCDC50Q8IVM0 306 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 GPR65Q8IYL9 337 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 C7orf61Q8IZ16 206 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 RCOR2Q8IZ40 523 aa13.31□□□□□ -0.28
TMED1-204ENST00000588289 CRIPAKQ8N1N5 446 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms