RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 PIWIL1Q96J94 861 aaKnown RBP17.38■□□□□ 0.37
NFIX-210ENST00000588228 CNPY3Q9BT09 278 aa17.38■□□□□ 0.37
NFIX-210ENST00000588228 RAB17Q9H0T7 212 aa17.38■□□□□ 0.37
NFIX-210ENST00000588228 PLEKHA4Q9H4M7 779 aa17.38■□□□□ 0.37
NFIX-210ENST00000588228 LRRC19Q9H756 370 aa17.38■□□□□ 0.37
NFIX-210ENST00000588228 ELAC1Q9H777 363 aaKnown RBP17.38■□□□□ 0.37
NFIX-210ENST00000588228 TMEM161AQ9NX61 479 aa17.38■□□□□ 0.37
NFIX-210ENST00000588228 FAM53CQ9NYF3 392 aa17.38■□□□□ 0.37
NFIX-210ENST00000588228 KANSL3Q9P2N6 904 aa17.38■□□□□ 0.37
NFIX-210ENST00000588228 UTP11Q9Y3A2 253 aaKnown RBP17.38■□□□□ 0.37
NFIX-210ENST00000588228 ESYT3A0FGR9 886 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 M0QZQ0 153 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 DPYSL4O14531 572 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 RRP9O43818 475 aaKnown RBP17.37■□□□□ 0.37
NFIX-210ENST00000588228 PDGFRAP16234 1089 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 NPR3P17342 541 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 PTPN7P35236 360 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 CARSP49589 748 aaKnown RBP17.37■□□□□ 0.37
NFIX-210ENST00000588228 KLF1Q13351 362 aaPredicted RBP17.37■□□□□ 0.37
NFIX-210ENST00000588228 GPNMBQ14956 572 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 ATP13A4Q4VNC1 1196 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 ODF2Q5BJF6 829 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 MDH1BQ5I0G3 518 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 NOMO2Q5JPE7 1267 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 CLLU1OSQ5K130 101 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 ZFYVE27Q5T4F4 411 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 METTL23Q86XA0 190 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 SCUBE3Q8IX30 993 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 RXFP2Q8WXD0 754 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 SEC14L1Q92503 715 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 APBB2Q92870 758 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 SLITRK1Q96PX8 696 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 CRTAC1Q9NQ79 661 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 HOMER3Q9NSC5 361 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 RASAL2Q9UJF2 1139 aa17.37■□□□□ 0.37
NFIX-210ENST00000588228 TIMM13Q9Y5L4 95 aaPredicted RBP17.37■□□□□ 0.37
NFIX-210ENST00000588228 PQBP1O60828 265 aaKnown RBP17.36■□□□□ 0.37
NFIX-210ENST00000588228 DESP17661 470 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 FLT3P36888 993 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 COILP38432 576 aaPredicted RBP17.36■□□□□ 0.37
NFIX-210ENST00000588228 DSC1Q08554 894 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 CASP8Q14790 479 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 TXNRD3NBQ6F5E7 133 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 TRNP1Q6NT89 227 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 CCDC137Q6PK04 289 aaKnown RBP17.36■□□□□ 0.37
NFIX-210ENST00000588228 PAQR9Q6ZVX9 377 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 ARCQ7LC44 396 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 DBF4BQ8NFT6 615 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 IFT81Q8WYA0 676 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 RSPH1Q8WYR4 309 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 SEPT8Q92599 483 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 CAVIN3Q969G5 261 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 RNF25Q96BH1 459 aaPredicted RBP17.36■□□□□ 0.37
NFIX-210ENST00000588228 HERPUD2Q9BSE4 406 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 CLDN5O00501 218 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 FAM200BP0CF97 657 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 MIPP30301 263 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 PTGIRP43119 386 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 TNNT3P45378 269 aaPredicted RBP17.36■□□□□ 0.37
NFIX-210ENST00000588228 BRCC3P46736 316 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 NNTQ13423 1086 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 LLGL1Q15334 1064 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 CCDC142Q17RM4 750 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 PAN2Q504Q3 1202 aaKnown RBP17.36■□□□□ 0.37
NFIX-210ENST00000588228 TTC27Q6P3X3 843 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 SPOCD1Q6ZMY3 1216 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 SLC26A9Q7LBE3 791 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 ANKRD33Q7Z3H0 272 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 PIGZQ86VD9 579 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 JAMLQ86YT9 394 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 KCTD13Q8WZ19 329 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 KHSRPQ92945 711 aaKnown RBP eCLIP17.36■□□□□ 0.37
NFIX-210ENST00000588228 SUSD3Q96L08 255 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 MED10Q9BTT4 135 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 B3GNT5Q9BYG0 378 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 KLHL11Q9NVR0 708 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 OGFRQ9NZT2 677 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 NFU1Q9UMS0 254 aa17.36■□□□□ 0.37
NFIX-210ENST00000588228 PI4K2BG5E9Z4 385 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 I3L4J1 428 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 ENPP3O14638 875 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 GRAP2O75791 330 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 LCP1P13796 627 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 TYMPP19971 482 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 IL1R2P27930 398 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 SDC4P31431 198 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 MFSD7Q6UXD7 560 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 CLEC20AQ6ZU45 233 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 ANKS1BQ7Z6G8 1248 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 CCDC105Q8IYK2 499 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 MYCBPAPQ8TBZ2 947 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 RAPGEF5Q92565 580 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 NCAPGQ9BPX3 1015 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 ACBD6Q9BR61 282 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 ERP44Q9BS26 406 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 HEMGNQ9BXL5 484 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 CRISPLD2Q9H0B8 497 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 ZWILCHQ9H900 591 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 VIPAS39Q9H9C1 493 aa17.35■□□□□ 0.37
NFIX-210ENST00000588228 FAM114A2Q9NRY5 505 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms