RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 HS2ST1Q7LGA3 356 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 CCDC65Q8IXS2 484 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 CCDC33Q8N5R6 958 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 TOP6BLQ8N6T0 577 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 LEO1Q8WVC0 666 aaPredicted RBP6.86□□□□□ -1.31
SDF2-205ENST00000587629 KBTBD7Q8WVZ9 684 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 FOXD4L4Q8WXT5 416 aaPredicted RBP6.86□□□□□ -1.31
SDF2-205ENST00000587629 ATP2A3Q93084 1043 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 MYLPFQ96A32 169 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 CCDC127Q96BQ5 260 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 TRMT2BQ96GJ1 504 aaKnown RBP6.86□□□□□ -1.31
SDF2-205ENST00000587629 MYRFLQ96LU7 910 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 MRPL45Q9BRJ2 306 aaKnown RBP6.86□□□□□ -1.31
SDF2-205ENST00000587629 TPSD1Q9BZJ3 242 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 RNF38Q9H0F5 515 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 DUSP15Q9H1R2 295 aaPredicted RBP6.86□□□□□ -1.31
SDF2-205ENST00000587629 SNX25Q9H3E2 840 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 TMEM206Q9H813 350 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 CRTAC1Q9NQ79 661 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 OLFML3Q9NRN5 406 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 INTS13Q9NVM9 706 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 SMPD4Q9NXE4 827 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 HSPBP1Q9NZL4 362 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 GCNT4Q9P109 453 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 TFIP11Q9UBB9 837 aaKnown RBP6.86□□□□□ -1.31
SDF2-205ENST00000587629 SDK1Q7Z5N4 2213 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 ATG2BQ96BY7 2078 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 CCDC163A0A0D9SF12 145 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 FRMD3A2A2Y4 597 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 SOBPA7XYQ1 873 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 F8VP50 259 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 K7EQS6 105 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 LEFTY2O00292 366 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 CLDN5O00501 218 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 CLIC2O15247 247 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 FOXD2O60548 495 aaPredicted RBP6.85□□□□□ -1.31
SDF2-205ENST00000587629 CLSTN1O94985 981 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 APBB3O95704 486 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 CAVIN2O95810 425 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 CST3P01034 146 aaPredicted RBP6.85□□□□□ -1.31
SDF2-205ENST00000587629 CENPBP07199 599 aaPredicted RBP6.85□□□□□ -1.31
SDF2-205ENST00000587629 TNNI1P19237 187 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 ANXA13P27216 316 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 CASP1P29466 404 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 GNL1P36915 607 aaPredicted RBP6.85□□□□□ -1.31
SDF2-205ENST00000587629 MPLP40238 635 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 MAGEA11P43364 429 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 SLC6A11P48066 632 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 CACNA2D1P54289 1103 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 ASIC1P78348 528 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 USP4Q13107 963 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 ALCAMQ13740 583 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 STK38Q15208 465 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 ELF2Q15723 593 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 FOXD4L6Q3SYB3 417 aaPredicted RBP6.85□□□□□ -1.31
SDF2-205ENST00000587629 FBXO43Q4G163 708 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 RNF43Q68DV7 783 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 ANO7Q6IWH7 933 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 FOXD4L3Q6VB84 417 aaPredicted RBP6.85□□□□□ -1.31
SDF2-205ENST00000587629 DENND5BQ6ZUT9 1274 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 STXBP4Q6ZWJ1 553 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 SYT13Q7L8C5 426 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 TRAPPC11Q7Z392 1133 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 FILIP1Q7Z7B0 1213 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 SFTPA1Q8IWL2 248 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 NELFCDQ8IXH7 590 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 CAMKK1Q8N5S9 505 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 TSTD1Q8NFU3 115 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 OR6B3Q8NGW1 331 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 EXOC4Q96A65 974 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 ELMO3Q96BJ8 720 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 DHX58Q96C10 678 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 PCED1BQ96HM7 432 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 FUBP3Q96I24 572 aaKnown RBP eCLIP6.85□□□□□ -1.31
SDF2-205ENST00000587629 LOXL4Q96JB6 756 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 ZC3H10Q96K80 434 aaKnown RBP6.85□□□□□ -1.31
SDF2-205ENST00000587629 DPEP3Q9H4B8 488 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 ZDHHC4Q9NPG8 344 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 TRPM5Q9NZQ8 1165 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 NXF1Q9UBU9 619 aaKnown RBP6.85□□□□□ -1.31
SDF2-205ENST00000587629 CDH9Q9ULB4 789 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 MTMR6Q9Y217 621 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 NME7Q9Y5B8 376 aa6.85□□□□□ -1.31
SDF2-205ENST00000587629 RALGAPA1Q6GYQ0 2036 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 EPG5Q9HCE0 2579 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 ZNF840PA6NDX5 716 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 C4orf47A7E2U8 309 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 TM4SF5O14894 197 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 GIPC1O14908 333 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 AKAP3O75969 853 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 RHOBTB1O94844 696 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 NFATC1O95644 943 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 CYP17A1P05093 508 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 PTPN1P18031 435 aaKnown RBP6.84□□□□□ -1.31
SDF2-205ENST00000587629 WARSP23381 471 aaKnown RBP6.84□□□□□ -1.31
SDF2-205ENST00000587629 OPRD1P41143 372 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 TNNC1P63316 161 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 KDSRQ06136 332 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 MESP2Q0VG99 397 aa6.84□□□□□ -1.31
SDF2-205ENST00000587629 TAF10Q12962 218 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms