RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 CAVIN2O95810 425 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 PDGFRBP09619 1106 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 ANXA13P27216 316 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 GNL1P36915 607 aaPredicted RBP8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 GRIK1P39086 918 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 OPRD1P41143 372 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 DGKEP52429 567 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 PSMC1P62191 440 aaKnown RBP8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 SLC7A9P82251 487 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 MRPS21P82921 87 aaKnown RBP8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 ZXDBP98169 803 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 CYP27A1Q02318 531 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 CEBPZQ03701 1054 aaKnown RBP8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 PSMD2Q13200 908 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 LMBRD2Q68DH5 695 aaPredicted RBP8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 RNF43Q68DV7 783 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 FAM173BQ6P4H8 233 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 TRAPPC11Q7Z392 1133 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 RASSF3Q86WH2 238 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 CBWD2Q8IUF1 395 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 ADGRG2Q8IZP9 1017 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 TTC16Q8NEE8 873 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 TSTD1Q8NFU3 115 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 NOC3LQ8WTT2 800 aaKnown RBP8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 MYLPFQ96A32 169 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 PCED1BQ96HM7 432 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 PANK2Q9BZ23 570 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 TNMDQ9H2S6 317 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 CUEDC2Q9H467 287 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 SMOC1Q9H4F8 434 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 ZSCAN16Q9H4T2 348 aaPredicted RBP8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 KBTBD4Q9NVX7 518 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 HSPBP1Q9NZL4 362 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 MMP17Q9ULZ9 603 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 RALGAPA1Q6GYQ0 2036 aa8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 MAP1BP46821 2468 aaKnown RBP8.57□□□□□ -1.04
CAPNS1-203ENST00000586963 A0A0A0MRY4 1105 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 F8VP50 259 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 DCLK1O15075 740 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 EIF3DO15371 548 aaKnown RBP eCLIP8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 OLFM2O95897 454 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 CST3P01034 146 aaPredicted RBP8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 KCNA4P22459 653 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 GBP1P32455 592 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 HOXD13P35453 343 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 EIF2DP41214 584 aaKnown RBP8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 NASPP49321 788 aaPredicted RBP8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 USP46P62068 366 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 SNRPFP62306 86 aaKnown RBP8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 AMPD3Q01432 767 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 CREB5Q02930 508 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 CRY1Q16526 586 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 GAB4Q2WGN9 574 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 HSF5Q4G112 596 aaPredicted RBP8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 DAB2IPQ5VWQ8 1189 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 TDRD10Q5VZ19 366 aaKnown RBP8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 PMS2CLQ68D20 193 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 TCEAL6Q6IPX3 200 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 CNNM4Q6P4Q7 775 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 EPM2AIP1Q7L775 607 aaPredicted RBP8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 DDX42Q86XP3 938 aaKnown RBP eCLIP8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 ZNF507Q8TCN5 953 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 TCEAL3Q969E4 200 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 INTS4Q96HW7 963 aaKnown RBP8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 CNOT6LQ96LI5 555 aaKnown RBP8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 USP28Q96RU2 1077 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 MMS19Q96T76 1030 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 EDEM2Q9BV94 578 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 TRIM9Q9C026 710 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 RNF38Q9H0F5 515 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 SNX25Q9H3E2 840 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 GREB1Q4ZG55 1949 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 DENND4CQ5VZ89 1909 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 FRYQ5TBA9 3013 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 SPAG17Q6Q759 2223 aa8.56□□□□□ -1.04
CAPNS1-203ENST00000586963 CEP295Q9C0D2 2601 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 USP24Q9UPU5 2620 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 TCHHQ07283 1943 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 C4orf47A7E2U8 309 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 KHNYNO15037 678 aaKnown RBP8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 TGFB1I1O43294 461 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 PPP6R2O75170 966 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 ALDH1A2O94788 518 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 STAU1O95793 577 aaKnown RBP8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 OAS1P00973 400 aaKnown RBP8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 CYP17A1P05093 508 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 PTPN1P18031 435 aaKnown RBP8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 TNNI1P19237 187 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 TAF10Q12962 218 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 PSMD6Q15008 389 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 DHCR24Q15392 516 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 E2F4Q16254 413 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 SNRNP35Q16560 246 aaKnown RBP8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 WDR72Q3MJ13 1102 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 C2orf27AQ580R0 203 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 MDH1BQ5I0G3 518 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 RHBDF2Q6PJF5 856 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 HS2ST1Q7LGA3 356 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 FILIP1Q7Z7B0 1213 aa8.55□□□□□ -1.04
CAPNS1-203ENST00000586963 PDILTQ8N807 584 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms