RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 WHAMMP3Q1A5X7 153 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 CFAP221Q4G0U5 840 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 C2CD6Q53TS8 623 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 MEI1Q5TIA1 1274 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 CCDC181Q5TID7 509 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 FAM171BQ6P995 826 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 VSTM1Q6UX27 236 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 CLEC20AQ6ZU45 233 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 TMCO2Q7Z6W1 182 aaPredicted RBP8.98□□□□□ -0.97
NPC1-204ENST00000586718 SLFN11Q7Z7L1 901 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 PHLDB2Q86SQ0 1253 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 PIGZQ86VD9 579 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 TMEM173Q86WV6 379 aaPredicted RBP8.98□□□□□ -0.97
NPC1-204ENST00000586718 WDTC1Q8N5D0 677 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 MNS1Q8NEH6 495 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 SPPL2BQ8TCT7 592 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 BCL7CQ8WUZ0 217 aaPredicted RBP8.98□□□□□ -0.97
NPC1-204ENST00000586718 SLC35F5Q8WV83 523 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 RIN2Q8WYP3 895 aaPredicted RBP8.98□□□□□ -0.97
NPC1-204ENST00000586718 PIK3R5Q8WYR1 880 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 KCTD13Q8WZ19 329 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 MCRS1Q96EZ8 462 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 RAD9AQ99638 391 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 NCAPGQ9BPX3 1015 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 LPIN3Q9BQK8 851 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 PLVAPQ9BX97 442 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 SLC4A5Q9BY07 1137 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 GPR62Q9BZJ7 368 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 ABCB6Q9NP58 842 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 ABI2Q9NYB9 513 aaPredicted RBP8.98□□□□□ -0.97
NPC1-204ENST00000586718 MTRRQ9UBK8 725 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 SNX12Q9UMY4 172 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 COG5Q9UP83 839 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 SSX2IPQ9Y2D8 614 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.98□□□□□ -0.97
NPC1-204ENST00000586718 BACE2Q9Y5Z0 518 aa8.98□□□□□ -0.97
NPC1-204ENST00000586718 CCDC66A2RUB6 948 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 SIGLEC16A6NMB1 481 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 PSTPIP1O43586 416 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 HSF2BPO75031 334 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 GPD1P21695 349 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 BDNFP23560 247 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 PSMA2P25787 234 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 CA8P35219 290 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 CTNNB1P35222 781 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 GRIK1P39086 918 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 SSR1P43307 286 aaKnown RBP8.97□□□□□ -0.97
NPC1-204ENST00000586718 MAGEA11P43364 429 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 EPHB4P54760 987 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 ARPP19P56211 112 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 SLC6A3Q01959 620 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 MRPL58Q14197 206 aaKnown RBP8.97□□□□□ -0.97
NPC1-204ENST00000586718 PIGHQ14442 188 aaPredicted RBP8.97□□□□□ -0.97
NPC1-204ENST00000586718 CLUL1Q15846 466 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 CCDC142Q17RM4 750 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 ODF2Q5BJF6 829 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 EFHC1Q5JVL4 640 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 RTP2Q5QGT7 225 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 SEL1L2Q5TEA6 688 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 KIAA0319Q5VV43 1072 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 PAPD7Q5XG87 772 aaKnown RBP8.97□□□□□ -0.97
NPC1-204ENST00000586718 PMF1Q6P1K2 205 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 LLGL2Q6P1M3 1020 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 C16orf59Q7L2K0 433 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 SLC26A9Q7LBE3 791 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 TMEM110Q86TL2 294 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 CEP112Q8N8E3 955 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 SP7Q8TDD2 431 aaPredicted RBP8.97□□□□□ -0.97
NPC1-204ENST00000586718 FNIP1Q8TF40 1166 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 FAM149B1Q96BN6 582 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 RNPC3Q96LT9 517 aaKnown RBP8.97□□□□□ -0.97
NPC1-204ENST00000586718 PKMYT1Q99640 499 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 UBXN6Q9BZV1 441 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 CNGB3Q9NQW8 809 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.97□□□□□ -0.97
NPC1-204ENST00000586718 ASNSD1Q9NWL6 643 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 CXXC1Q9P0U4 656 aaPredicted RBP8.97□□□□□ -0.97
NPC1-204ENST00000586718 CHORDC1Q9UHD1 332 aaPredicted RBP8.97□□□□□ -0.97
NPC1-204ENST00000586718 CDC23Q9UJX2 597 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 USTQ9Y2C2 406 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 MRFAP1Q9Y605 127 aa8.97□□□□□ -0.97
NPC1-204ENST00000586718 MKI67P46013 3256 aaKnown RBP8.97□□□□□ -0.97
NPC1-204ENST00000586718 PLXNA3P51805 1871 aa8.96□□□□□ -0.97
NPC1-204ENST00000586718 GBF1Q92538 1859 aa8.96□□□□□ -0.97
NPC1-204ENST00000586718 PLXNA4Q9HCM2 1894 aa8.96□□□□□ -0.97
NPC1-204ENST00000586718 MTMR11A4FU01 709 aa8.96□□□□□ -0.98
NPC1-204ENST00000586718 TMEM191CA6NGB0 347 aa8.96□□□□□ -0.98
NPC1-204ENST00000586718 TULP2O00295 520 aa8.96□□□□□ -0.98
NPC1-204ENST00000586718 PIK3R2O00459 728 aa8.96□□□□□ -0.98
NPC1-204ENST00000586718 CES2O00748 559 aa8.96□□□□□ -0.98
NPC1-204ENST00000586718 KCNK3O14649 394 aa8.96□□□□□ -0.98
NPC1-204ENST00000586718 PAPSS1O43252 624 aaPredicted RBP8.96□□□□□ -0.98
NPC1-204ENST00000586718 NCK2O43639 380 aa8.96□□□□□ -0.98
NPC1-204ENST00000586718 LPXNO60711 386 aa8.96□□□□□ -0.98
NPC1-204ENST00000586718 DAB1O75553 588 aa8.96□□□□□ -0.98
NPC1-204ENST00000586718 RNF8O76064 485 aa8.96□□□□□ -0.98
NPC1-204ENST00000586718 GLI1P08151 1106 aa8.96□□□□□ -0.98
NPC1-204ENST00000586718 OR4Q2P0C623 313 aa8.96□□□□□ -0.98
NPC1-204ENST00000586718 PRLRP16471 622 aa8.96□□□□□ -0.98
NPC1-204ENST00000586718 COMTP21964 271 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms