RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 B3GALNT2Q8NCR0 500 aa18.08■□□□□ 0.48
TRIM47-203ENST00000586495 PLEKHO2Q8TD55 490 aa18.08■□□□□ 0.48
TRIM47-203ENST00000586495 OSCP1Q8WVF1 389 aa18.08■□□□□ 0.48
TRIM47-203ENST00000586495 TTLL2Q9BWV7 592 aa18.08■□□□□ 0.48
TRIM47-203ENST00000586495 DUS2Q9NX74 493 aaKnown RBP18.08■□□□□ 0.48
TRIM47-203ENST00000586495 GCNT4Q9P109 453 aa18.08■□□□□ 0.48
TRIM47-203ENST00000586495 ATP8B3O60423 1300 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 A0A1W2PQ27 194 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 A0A1W2PQ64 194 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 A0A1W2PQD8 194 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 C2orf78A6NCI8 922 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 RHOBTB3O94955 611 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 TCF3P15923 654 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 NDUFA8P51970 172 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 NOP14P78316 857 aaKnown RBP18.07■□□□□ 0.48
TRIM47-203ENST00000586495 FOXK2Q01167 660 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 USP4Q13107 963 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 NR1H3Q13133 447 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 ZNF77Q15935 545 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 TMEM196Q5HYL7 178 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 WDR44Q5JSH3 913 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 CEP135Q66GS9 1140 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 Q6ZS52 159 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 TTC16Q8NEE8 873 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 RIN3Q8TB24 985 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 TMC2Q8TDI7 906 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 SH3RF2Q8TEC5 729 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 ATP2A3Q93084 1043 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 CCDC34Q96HJ3 373 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 TNIP3Q96KP6 325 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 SLC22A12Q96S37 553 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 DPEP3Q9H4B8 488 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 ECT2Q9H8V3 914 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 GMEB2Q9UKD1 530 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 ARHGAP26Q9UNA1 814 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 TRAF3IP3Q9Y228 551 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 NME7Q9Y5B8 376 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 KIF26AQ9ULI4 1882 aaPredicted RBP18.07■□□□□ 0.48
TRIM47-203ENST00000586495 GVINP1Q7Z2Y8 2422 aa18.07■□□□□ 0.48
TRIM47-203ENST00000586495 IKBKBO14920 756 aa18.06■□□□□ 0.48
TRIM47-203ENST00000586495 ATG13O75143 517 aa18.06■□□□□ 0.48
TRIM47-203ENST00000586495 ARSAP15289 507 aa18.06■□□□□ 0.48
TRIM47-203ENST00000586495 CNR2P34972 360 aa18.06■□□□□ 0.48
TRIM47-203ENST00000586495 USP46P62068 366 aa18.06■□□□□ 0.48
TRIM47-203ENST00000586495 SGSM1Q2NKQ1 1148 aa18.06■□□□□ 0.48
TRIM47-203ENST00000586495 CHAMP1Q96JM3 812 aa18.06■□□□□ 0.48
TRIM47-203ENST00000586495 SLITRK1Q96PX8 696 aa18.06■□□□□ 0.48
TRIM47-203ENST00000586495 SMYD3Q9H7B4 428 aa18.06■□□□□ 0.48
TRIM47-203ENST00000586495 OTOGLQ3ZCN5 2332 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 OTOL1A6NHN0 477 aaPredicted RBP18.05■□□□□ 0.48
TRIM47-203ENST00000586495 K7ESF4 209 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 MAPK13O15264 365 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 RTN3O95197 1032 aaPredicted RBP18.05■□□□□ 0.48
TRIM47-203ENST00000586495 DRD1P21728 446 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 HOXA6P31267 233 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 GJA4P35212 333 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 CDH8P55286 799 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 DPYDQ12882 1025 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 ZACNQ401N2 412 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 FBXO43Q4G163 708 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 KRBA2Q6ZNG9 492 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 LONP2Q86WA8 852 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 TAF4BQ92750 862 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 P2RY13Q9BPV8 354 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 MED10Q9BTT4 135 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 B3GNT5Q9BYG0 378 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 ZNF518BQ9C0D4 1074 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 PTPRDP23468 1912 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 GREB1Q4ZG55 1949 aa18.05■□□□□ 0.48
TRIM47-203ENST00000586495 ANAPC1Q9H1A4 1944 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 ZNF840PA6NDX5 716 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 CHURC1-FNTBB4DL54 471 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 CLDN5O00501 218 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 ZNF202O95125 648 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 VNN1O95497 513 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 ABL1P00519 1130 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 PRR29P0C7W0 189 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 TRIM21P19474 475 aaKnown RBP18.04■□□□□ 0.48
TRIM47-203ENST00000586495 RPL13P26373 211 aaKnown RBP18.04■□□□□ 0.48
TRIM47-203ENST00000586495 FNTBP49356 437 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 GALK1P51570 392 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 VAMP7P51809 220 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 DLG4P78352 724 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 TAF10Q12962 218 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 NFIL3Q16649 462 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 FSTL4Q6MZW2 842 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 SCARA5Q6ZMJ2 495 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 SV2AQ7L0J3 742 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 ERMP1Q7Z2K6 904 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 NUP93Q8N1F7 819 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 KIAA1958Q8N8K9 716 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 PDZD8Q8NEN9 1154 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 WNT6Q9Y6F9 365 aa18.04■□□□□ 0.48
TRIM47-203ENST00000586495 NFATC1O95644 943 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 KRT13P13646 458 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 NR2F2P24468 414 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 YWHAQP27348 245 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 RAP1GAPP47736 663 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 SLC7A9P82251 487 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 IFRD2Q12894 506 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms