RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 KCNJ18B7U540 433 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 DPYSL4O14531 572 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 LRRN2O75325 713 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 ASGR2P07307 311 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 VDRP11473 427 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 NPR3P17342 541 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 PSMC3P17980 439 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 YWHAQP27348 245 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 AVPR1AP37288 418 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 GPR15P49685 360 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 TUBP50607 506 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 NUBP1P53384 320 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 RAD23BP54727 409 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 MFAP3P55082 362 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 MLLT6P55198 1093 aaPredicted RBP14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 PLCB2Q00722 1185 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 KCNJ12Q14500 433 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 VWA3BQ502W6 1294 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 SGO2Q562F6 1265 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 TCP11X2Q5H9J9 407 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 PAQR9Q6ZVX9 377 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 SLC4A11Q8NBS3 891 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 STKLD1Q8NE28 680 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 FGF14Q92915 247 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 TATDN2Q93075 761 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 TUBGCP2Q9BSJ2 902 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 NDST4Q9H3R1 872 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 EPHX3Q9H6B9 360 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 SAMSN1Q9NSI8 373 aaKnown RBP14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 HESX1Q9UBX0 185 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 APEX2Q9UBZ4 518 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 HMGXB4Q9UGU5 601 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 OBSL1O75147 1896 aa14.63□□□□□ -0.07
PRKCSH-202ENST00000585540 A0A0C4DFX4 3053 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 TRAV19A0A0A6YYK7 116 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 SMTNL1A8MU46 457 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 SETSIPP0DME0 302 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 FCARP24071 287 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 PSEN1P49768 467 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 SLC5A3P53794 718 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 BCAT1P54687 386 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 CCDC142Q17RM4 750 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 FAM78AQ5JUQ0 283 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 CDKAL1Q5VV42 579 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 SNX30Q5VWJ9 437 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 TRIM65Q6PJ69 517 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 PARM1Q6UWI2 310 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 CREBRFQ8IUR6 639 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 MFSD6LQ8IWD5 586 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 CMTM8Q8IZV2 173 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 CELF5Q8N6W0 485 aaKnown RBP14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 KHSRPQ92945 711 aaKnown RBP eCLIP14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 IRF7Q92985 503 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 SHDQ96IW2 340 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 HEXIM2Q96MH2 286 aaKnown RBP14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 TWNKQ96RR1 684 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 DUSP16Q9BY84 665 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 KCNH6Q9H252 994 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.62□□□□□ -0.075e-7■■□□□ 13.3
PRKCSH-202ENST00000585540 CNTN6Q9UQ52 1028 aa14.62□□□□□ -0.07
PRKCSH-202ENST00000585540 TMEM221A6NGB7 291 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 M0R296 226 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 CLDN5O00501 218 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 TNFRSF10BO14763 440 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 CHADO15335 359 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 USP17L7P0C7H9 530 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 CCDC130P13994 396 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 GLULP15104 373 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 PRKCQQ04759 706 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 NCAPHQ15003 741 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 ARHGAP29Q52LW3 1261 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 CLEC20AQ6ZU45 233 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 TMEM150AQ86TG1 271 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 TADA2BQ86TJ2 420 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 DDX42Q86XP3 938 aaKnown RBP eCLIP14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 ARID3BQ8IVW6 561 aaPredicted RBP14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 YAF2Q8IY57 180 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 AOPEPQ8N6M6 819 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 ANKRD52Q8NB46 1076 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 ASIC4Q96FT7 647 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 CDK5RAP1Q96SZ6 601 aaKnown RBP14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 TRMT61BQ9BVS5 477 aaKnown RBP14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 FAM49BQ9NUQ9 324 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 THG1LQ9NWX6 298 aaKnown RBP14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 FBXL21Q9UKT6 434 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 PCDHB4Q9Y5E5 795 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 MYH10P35580 1976 aa14.61□□□□□ -0.07
PRKCSH-202ENST00000585540 ZNF638Q14966 1978 aaKnown RBP14.6□□□□□ -0.07
PRKCSH-202ENST00000585540 TECTAO75443 2155 aa14.6□□□□□ -0.07
PRKCSH-202ENST00000585540 XPO1O14980 1071 aaKnown RBP14.6□□□□□ -0.07
PRKCSH-202ENST00000585540 MED7O43513 233 aa14.6□□□□□ -0.07
PRKCSH-202ENST00000585540 TADA3O75528 432 aa14.6□□□□□ -0.07
PRKCSH-202ENST00000585540 ADORA2BP29275 332 aa14.6□□□□□ -0.07
PRKCSH-202ENST00000585540 MAP3K7CLP57077 242 aa14.6□□□□□ -0.07
PRKCSH-202ENST00000585540 CYP4F8P98187 520 aa14.6□□□□□ -0.07
PRKCSH-202ENST00000585540 FCHO2Q0JRZ9 810 aa14.6□□□□□ -0.07
PRKCSH-202ENST00000585540 BST2Q10589 180 aaKnown RBP14.6□□□□□ -0.07
PRKCSH-202ENST00000585540 LRMPQ12912 555 aa14.6□□□□□ -0.07
PRKCSH-202ENST00000585540 ZNF394Q53GI3 561 aa14.6□□□□□ -0.07
PRKCSH-202ENST00000585540 FKBP15Q5T1M5 1219 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms