RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FAM71DQ8N9W8 422 aa14.86□□□□□ -0.03
CDK5RAP3-237ENST00000585163 KCTD6Q8NC69 237 aa14.86□□□□□ -0.03
CDK5RAP3-237ENST00000585163 CPXM1Q96SM3 734 aa14.86□□□□□ -0.03
CDK5RAP3-237ENST00000585163 CYTH2Q99418 400 aa14.86□□□□□ -0.03
CDK5RAP3-237ENST00000585163 WDR35Q9P2L0 1181 aa14.86□□□□□ -0.03
CDK5RAP3-237ENST00000585163 PRKCBP05771 671 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 SRGAP2CP0DJJ0 459 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 EIF3EP60228 445 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 RNASELQ05823 741 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 LAMTOR4Q0VGL1 99 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 MTM1Q13496 603 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 DPYSL3Q14195 570 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 WASHC2DQ5SRD0 308 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 MICALL2Q8IY33 904 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 CHST13Q8NET6 341 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 C12orf65Q9H3J6 166 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 METTL5Q9NRN9 209 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 NXF1Q9UBU9 619 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 POLIQ9UNA4 740 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 FZD1Q9UP38 647 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 SRCAPQ6ZRS2 3230 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 B4GALT4O60513 344 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 TNNC2P02585 160 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 DHRS4L1P0CG22 281 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 TPBGLP0DKB5 382 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 RBP3P10745 1247 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 BASP1P80723 227 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 RFX6Q8HWS3 928 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 ENDOVQ8N8Q3 282 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 RNF149Q8NC42 400 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 RFWD2Q8NHY2 731 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 PTPRN2Q92932 1015 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 KLF6Q99612 283 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 PCSK1NQ9UHG2 260 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 DCTN4Q9UJW0 460 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 PPME1Q9Y570 386 aa14.85□□□□□ -0.03
CDK5RAP3-237ENST00000585163 MCF2LO15068 1137 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 ERBB2P04626 1255 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 PROZP22891 400 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 MIPP30301 263 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 TCF7P36402 384 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 RAD23BP54727 409 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 OVGP1Q12889 678 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 MXD4Q14582 209 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 ACAP1Q15027 740 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 TAF5Q15542 800 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 IGDCC3Q8IVU1 814 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 ZBTB8OSQ8IWT0 167 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 SPATA18Q8TC71 538 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 SH3TC2Q8TF17 1288 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 ANKRD36BP1Q96IX9 119 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 NUDCD1Q96RS6 583 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 TRIM55Q9BYV6 548 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 BCO2Q9BYV7 579 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 CHMP2BQ9UQN3 213 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 LRRC42Q9Y546 428 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 IQANK1A0A1B0GTG1 560 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 TCRBV9S1A1TA0A576 114 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 LPXNO60711 386 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 MT-ND3P03897 115 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 STIP1P31948 543 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 ELK3P41970 407 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 ETV4P43268 484 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 RAP1GAPP47736 663 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 HIRAP54198 1017 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 MPZL3Q6UWV2 235 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 TSHZ1Q6ZSZ6 1077 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 SH2D5Q6ZV89 423 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 CHSY1Q86X52 802 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 KCNV2Q8TDN2 545 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 TSSK1BQ9BXA7 367 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 DENND2DQ9H6A0 471 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 SYNCQ9H7C4 482 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 RSAD1Q9HA92 442 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 PTPRHQ9HD43 1115 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 USP18Q9UMW8 372 aa14.84□□□□□ -0.03
CDK5RAP3-237ENST00000585163 SSC5DA1L4H1 1573 aa14.83□□□□□ -0.03
CDK5RAP3-237ENST00000585163 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ECM2O94769 699 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TRUB2O95900 331 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 NEK3P51956 506 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PTK7Q13308 1070 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PRAMEF18Q5VWM3 479 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SLC44A1Q8WWI5 657 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SEPT1Q8WYJ6 367 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 HSPH1Q92598 858 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 FAM167AQ96KS9 214 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CALN1Q9BXU9 219 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 AFG3L2Q9Y4W6 797 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TEX264Q9Y6I9 313 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 A0A0G2JND7 137 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 GAS2O43903 313 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 RNF8O76064 485 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TGDSO95455 350 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 EDNRBP24530 442 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 MARK3P27448 753 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 NRLP54845 237 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CDH8P55286 799 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SLC18A2Q05940 514 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TAF11Q15544 211 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms