RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 TM4SF5O14894 197 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 GDF9O60383 454 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 CUTAO60888 179 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 RHOBTB1O94844 696 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 YEATS4O95619 227 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 APBB3O95704 486 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 CST3P01034 146 aaPredicted RBP16.02■□□□□ 0.16
VAPA-209ENST00000585042 PDGFRBP09619 1106 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 BDNFP23560 247 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 PXNP49023 591 aaPredicted RBP16.02■□□□□ 0.16
VAPA-209ENST00000585042 SLC7A9P82251 487 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 PSMD6Q15008 389 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 SNRNP35Q16560 246 aaKnown RBP16.02■□□□□ 0.16
VAPA-209ENST00000585042 AASDHQ4L235 1098 aaPredicted RBP16.02■□□□□ 0.16
VAPA-209ENST00000585042 LMBRD2Q68DH5 695 aaPredicted RBP16.02■□□□□ 0.16
VAPA-209ENST00000585042 IL31Q6EBC2 164 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 C11orf74Q86VG3 221 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 RPLP0P6Q8NHW5 317 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 MYLPFQ96A32 169 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 PCED1BQ96HM7 432 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 FNBP1Q96RU3 617 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 LINC00597Q9H2U6 94 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 SNX25Q9H3E2 840 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 VPS45Q9NRW7 570 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 WNT6Q9Y6F9 365 aa16.02■□□□□ 0.16
VAPA-209ENST00000585042 SPTBN2O15020 2390 aa16.02■□□□□ 0.15
VAPA-209ENST00000585042 ZNF840PA6NDX5 716 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 TGFB1I1O43294 461 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 HCRTO43612 131 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 TNNI1P19237 187 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 HOXC13P31276 330 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 ATICP31939 592 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 CYP27A1Q02318 531 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 DMC1Q14565 340 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 ELF2Q15723 593 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 PLK5Q496M5 336 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 FAM26FQ5R3K3 315 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 HS2ST1Q7LGA3 356 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 C12orf56Q8IXR9 622 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 ADGRG2Q8IZP9 1017 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 XXYLT1Q8NBI6 393 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 GLIS3Q8NEA6 775 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 FAM84AQ96KN4 292 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 CGRRF1Q99675 332 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 AGPAT3Q9NRZ7 376 aa16.01■□□□□ 0.15
VAPA-209ENST00000585042 TPRP12270 2363 aaKnown RBP16■□□□□ 0.15
VAPA-209ENST00000585042 ATG2BQ96BY7 2078 aa16■□□□□ 0.15
VAPA-209ENST00000585042 PVALEFA0A1B0GWK0 134 aa16■□□□□ 0.15
VAPA-209ENST00000585042 K7ELQ4 463 aaPredicted RBP16■□□□□ 0.15
VAPA-209ENST00000585042 LEFTY2O00292 366 aa16■□□□□ 0.15
VAPA-209ENST00000585042 OLFM2O95897 454 aa16■□□□□ 0.15
VAPA-209ENST00000585042 PTPN1P18031 435 aaKnown RBP16■□□□□ 0.15
VAPA-209ENST00000585042 PSMC1P62191 440 aaKnown RBP16■□□□□ 0.15
VAPA-209ENST00000585042 ASIC1P78348 528 aa16■□□□□ 0.15
VAPA-209ENST00000585042 CYP24A1Q07973 514 aa16■□□□□ 0.15
VAPA-209ENST00000585042 EHHADHQ08426 723 aa16■□□□□ 0.15
VAPA-209ENST00000585042 PSMD2Q13200 908 aa16■□□□□ 0.15
VAPA-209ENST00000585042 CCDC142Q17RM4 750 aa16■□□□□ 0.15
VAPA-209ENST00000585042 WDR72Q3MJ13 1102 aa16■□□□□ 0.15
VAPA-209ENST00000585042 TDRD10Q5VZ19 366 aaKnown RBP16■□□□□ 0.15
VAPA-209ENST00000585042 UNC13DQ70J99 1090 aa16■□□□□ 0.15
VAPA-209ENST00000585042 DDX42Q86XP3 938 aaKnown RBP eCLIP16■□□□□ 0.15
VAPA-209ENST00000585042 RDH13Q8NBN7 331 aa16■□□□□ 0.15
VAPA-209ENST00000585042 OVCA2Q8WZ82 227 aa16■□□□□ 0.15
VAPA-209ENST00000585042 EZH1Q92800 747 aaPredicted RBP16■□□□□ 0.15
VAPA-209ENST00000585042 HPS3Q969F9 1004 aa16■□□□□ 0.15
VAPA-209ENST00000585042 SLITRK1Q96PX8 696 aa16■□□□□ 0.15
VAPA-209ENST00000585042 ELOVL4Q9GZR5 314 aa16■□□□□ 0.15
VAPA-209ENST00000585042 DUSP15Q9H1R2 295 aaPredicted RBP16■□□□□ 0.15
VAPA-209ENST00000585042 ACACBO00763 2458 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 A0A0A0MRY4 1105 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 DLATP10515 647 aaKnown RBP15.99■□□□□ 0.15
VAPA-209ENST00000585042 EIF2DP41214 584 aaKnown RBP15.99■□□□□ 0.15
VAPA-209ENST00000585042 AP3M2P53677 418 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 USP46P62068 366 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 TNNC1P63316 161 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 MRPS21P82921 87 aaKnown RBP15.99■□□□□ 0.15
VAPA-209ENST00000585042 ZXDBP98169 803 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 SF3A2Q15428 464 aaKnown RBP15.99■□□□□ 0.15
VAPA-209ENST00000585042 BMT2Q1RMZ1 405 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 HSF5Q4G112 596 aaPredicted RBP15.99■□□□□ 0.15
VAPA-209ENST00000585042 USP39Q53GS9 565 aaKnown RBP15.99■□□□□ 0.15
VAPA-209ENST00000585042 OR6B3Q8NGW1 331 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 USP33Q8TEY7 942 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 TMEM174Q8WUU8 243 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 SYAP1Q96A49 352 aaPredicted RBP15.99■□□□□ 0.15
VAPA-209ENST00000585042 DHX58Q96C10 678 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 HHIPQ96QV1 700 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 MRPL45Q9BRJ2 306 aaKnown RBP15.99■□□□□ 0.15
VAPA-209ENST00000585042 RNF38Q9H0F5 515 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 VRTNQ9H8Y1 702 aa15.99■□□□□ 0.15
VAPA-209ENST00000585042 TFIP11Q9UBB9 837 aaKnown RBP15.99■□□□□ 0.15
VAPA-209ENST00000585042 PTPRDP23468 1912 aa15.98■□□□□ 0.15
VAPA-209ENST00000585042 SDK1Q7Z5N4 2213 aa15.98■□□□□ 0.15
VAPA-209ENST00000585042 F8VP50 259 aa15.98■□□□□ 0.15
VAPA-209ENST00000585042 K7EQS6 105 aa15.98■□□□□ 0.15
VAPA-209ENST00000585042 RTN3O95197 1032 aaPredicted RBP15.98■□□□□ 0.15
VAPA-209ENST00000585042 OAS1P00973 400 aaKnown RBP15.98■□□□□ 0.15
VAPA-209ENST00000585042 MPLP40238 635 aa15.98■□□□□ 0.15
VAPA-209ENST00000585042 OPRD1P41143 372 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms