RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
SREBF1-223ENST00000584760 PTPN1P18031 435 aaKnown RBP14.18□□□□□ -0.14
SREBF1-223ENST00000584760 CACNA2D1P54289 1103 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 UBE2HP62256 183 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 NOP14P78316 857 aaKnown RBP14.18□□□□□ -0.14
SREBF1-223ENST00000584760 LRRC63Q05C16 580 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 FCHO2Q0JRZ9 810 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 ANKRD40Q6AI12 368 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 SPOPLQ6IQ16 392 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 ZNF852Q6ZMS4 543 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 MFSD6LQ8IWD5 586 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 SCN4BQ8IWT1 228 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 E2F7Q96AV8 911 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 CEP295NLQ96MC4 621 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 TSG101Q99816 390 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 TRMT61BQ9BVS5 477 aaKnown RBP14.18□□□□□ -0.14
SREBF1-223ENST00000584760 TMEM8AQ9HCN3 771 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 HEBP1Q9NRV9 189 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 TMEM30AQ9NV96 361 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 UXTQ9UBK9 157 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-223ENST00000584760 ZMYM5Q9UJ78 669 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 MAGED2Q9UNF1 606 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-223ENST00000584760 FANCMQ8IYD8 2048 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 F5P12259 2224 aa14.18□□□□□ -0.14
SREBF1-223ENST00000584760 SHISA7A6NL88 538 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 PSMA7O14818 248 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 SLC16A3O15427 465 aaKnown RBP14.17□□□□□ -0.14
SREBF1-223ENST00000584760 P4HA1P13674 534 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 TGM1P22735 817 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 CCNE1P24864 410 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 DDX6P26196 483 aaKnown RBP eCLIP14.17□□□□□ -0.145e-6■■■■■ 29.6
SREBF1-223ENST00000584760 GDI1P31150 447 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 GTF2H1P32780 548 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 FKBP3Q00688 224 aaKnown RBP14.17□□□□□ -0.14
SREBF1-223ENST00000584760 MTAPQ13126 283 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 LPAL2Q16609 132 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 ISM2Q6H9L7 571 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 NELL1Q92832 810 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 IRF7Q92985 503 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 SPATA17Q96L03 361 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 LRRC3BQ96PB8 259 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 RTKNQ9BST9 563 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 SLC46A2Q9BY10 475 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 B3GNT5Q9BYG0 378 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 ZNF518BQ9C0D4 1074 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 ELOVL4Q9GZR5 314 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 MMRN2Q9H8L6 949 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 BRD9Q9H8M2 597 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 APOBEC3GQ9HC16 384 aaKnown RBP14.17□□□□□ -0.14
SREBF1-223ENST00000584760 PARD6AQ9NPB6 346 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 TRPV5Q9NQA5 729 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 OBP2AQ9NY56 170 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 HMGXB4Q9UGU5 601 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 GMEB2Q9UKD1 530 aa14.17□□□□□ -0.14
SREBF1-223ENST00000584760 MRPS17Q9Y2R5 130 aaKnown RBP14.17□□□□□ -0.14
SREBF1-223ENST00000584760 SOBPA7XYQ1 873 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 F8VP50 259 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 CLDN5O00501 218 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 TRIM66O15016 1216 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 GRIK1P39086 918 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 PPP1R2P41236 205 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 RPS9P46781 194 aaKnown RBP14.16□□□□□ -0.14
SREBF1-223ENST00000584760 MXI1P50539 228 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 INCA1Q0VD86 236 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 FZD5Q13467 585 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 STIM1Q13586 685 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 MORC3Q14149 939 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 KRT39Q6A163 491 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 GPIHBP1Q8IV16 184 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 CMTM8Q8IZV2 173 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 DHTKD1Q96HY7 919 aaPredicted RBP14.16□□□□□ -0.14
SREBF1-223ENST00000584760 TNIP3Q96KP6 325 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 C8orf48Q96LL4 319 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 TTLL2Q9BWV7 592 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 IMPG2Q9BZV3 1241 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 NIF3L1Q9GZT8 377 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.16□□□□□ -0.141e-7■■■■■ 44.7
SREBF1-223ENST00000584760 NDRG2Q9UN36 371 aaKnown RBP14.16□□□□□ -0.14
SREBF1-223ENST00000584760 CACNA1BQ00975 2339 aa14.16□□□□□ -0.14
SREBF1-223ENST00000584760 EPG5Q9HCE0 2579 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 PPP1R3GB7ZBB8 358 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 ANXA13P27216 316 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 NDST1P52848 882 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 USP46P62068 366 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 SPEM2Q0P670 501 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 DCAF17Q5H9S7 520 aaPredicted RBP14.15□□□□□ -0.14
SREBF1-223ENST00000584760 TXNDC8Q6A555 127 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 TTI2Q6NXR4 508 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 FOXR2Q6PJQ5 311 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 DENND5BQ6ZUT9 1274 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 PAQR9Q6ZVX9 377 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 ACOT1Q86TX2 421 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 FAM35AQ86V20 835 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 MON1AQ86VX9 555 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 UNC93AQ86WB7 457 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 FUKQ8N0W3 1084 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 MAB21L3Q8N8X9 362 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 MRPS31Q92665 395 aaKnown RBP14.15□□□□□ -0.14
SREBF1-223ENST00000584760 SEMA4DQ92854 862 aa14.15□□□□□ -0.14
SREBF1-223ENST00000584760 SMG9Q9H0W8 520 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms