RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 COL24A1Q17RW2 1714 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 CEP350Q5VT06 3117 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 THSD7AQ9UPZ6 1657 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 CASTOR2A6NHX0 329 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 ATP9BO43861 1147 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 SLC4A1P02730 911 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 IQCF3P0C7M6 154 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 VCPP55072 806 aaKnown RBP11.81□□□□□ -0.52
TOP3A-217ENST00000584582 GDF10P55107 478 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 MAP3K10Q02779 954 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 ACVR2BQ13705 512 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 CCDC142Q17RM4 750 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 PPP1R26Q5T8A7 1209 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-217ENST00000584582 LVRNQ6Q4G3 990 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 C3orf20Q8ND61 904 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 APPL2Q8NEU8 664 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 SLC2A14Q8TDB8 520 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 MRPL45Q9BRJ2 306 aaKnown RBP11.81□□□□□ -0.52
TOP3A-217ENST00000584582 APOL1O14791 398 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 LIASO43766 372 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 LRCH4O75427 683 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 HMGCRP04035 888 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 SLC10A6Q3KNW5 377 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 HEATR6Q6AI08 1181 aaKnown RBP11.81□□□□□ -0.52
TOP3A-217ENST00000584582 PID1Q7Z2X4 250 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 ATP11CQ8NB49 1132 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 KCNV2Q8TDN2 545 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 EDEM1Q92611 657 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 ART4Q93070 314 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 PIWIL1Q96J94 861 aaKnown RBP11.81□□□□□ -0.52
TOP3A-217ENST00000584582 ETNK1Q9HBU6 452 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 GBA2Q9HCG7 927 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-217ENST00000584582 CD248Q9HCU0 757 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.81□□□□□ -0.52
TOP3A-217ENST00000584582 UBP1Q9NZI7 540 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 KLHL8Q9P2G9 620 aaPredicted RBP11.81□□□□□ -0.52
TOP3A-217ENST00000584582 TAF1LQ8IZX4 1826 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 IQCA1LA6NCM1 817 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 USP12O75317 370 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 STBD1O95210 358 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 PGK1P00558 417 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 HOXC6P09630 235 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 IL1R2P27930 398 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 ABCG1P45844 678 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 CAV1Q03135 178 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 STAT4Q14765 748 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 FAM183BPQ6ZVS7 135 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 SPATA21Q7Z572 469 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 TTC13Q8NBP0 860 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 LPPQ93052 612 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 PPP1R36Q96LQ0 422 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 FAM129AQ9BZQ8 928 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 ABCF3Q9NUQ8 709 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 COL4A5P29400 1685 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 CNTNAP2Q9UHC6 1331 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 A0A1W2PPM1 405 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 FAM47DPA6NHR8 397 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 KCNK1O00180 336 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 GRIN3BO60391 1043 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 CYP1A1P04798 512 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-217ENST00000584582 SULT1E1P49888 294 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 SNX16P57768 344 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 ANKRD22Q5VYY1 191 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 PLEKHA7Q6IQ23 1121 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 ANKS1BQ7Z6G8 1248 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 PLEKHH3Q7Z736 793 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 PHF13Q86YI8 300 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-217ENST00000584582 KATNAL2Q8IYT4 538 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 SYT11Q9BT88 431 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 KLC2Q9H0B6 622 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 SPC25Q9HBM1 224 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 ZC3H7BQ9UGR2 993 aaKnown RBP11.8□□□□□ -0.52
TOP3A-217ENST00000584582 STK10O94804 968 aaKnown RBP11.8□□□□□ -0.52
TOP3A-217ENST00000584582 TROVE2P10155 538 aaKnown RBP eCLIP11.8□□□□□ -0.52
TOP3A-217ENST00000584582 EZRP15311 586 aaKnown RBP11.8□□□□□ -0.52
TOP3A-217ENST00000584582 AMPD1P23109 780 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 KDELR1P24390 212 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 RBL1P28749 1068 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 ELK3P41970 407 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 RAD23BP54727 409 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 MAP3K7CLP57077 242 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 ZNF484Q5JVG2 852 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 CXCL17Q6UXB2 119 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 VPS52Q8N1B4 723 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 SLC7A14Q8TBB6 771 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 CCHCR1Q8TD31 782 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 DEPDC1BQ8WUY9 529 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 DPEP3Q9H4B8 488 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 CDHR5Q9HBB8 845 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 BARX2Q9UMQ3 279 aaPredicted RBP11.8□□□□□ -0.52
TOP3A-217ENST00000584582 FIS1Q9Y3D6 152 aa11.8□□□□□ -0.52
TOP3A-217ENST00000584582 LPXNO60711 386 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 POMCP01189 267 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 VDRP11473 427 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 ICAM3P32942 547 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 TMPRSS15P98073 1019 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 MBTD1Q05BQ5 628 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 PPIL2Q13356 520 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 TRIM68Q6AZZ1 485 aa11.79□□□□□ -0.52
TOP3A-217ENST00000584582 IL31Q6EBC2 164 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms