RNA–Protein interactions for RNA: ENST00000584052.5

RIOK3-208, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 659 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-208ENST00000584052 TNMDQ9H2S6 317 aa16.17■□□□□ 0.18
RIOK3-208ENST00000584052 CIZ1Q9ULV3 898 aaPredicted RBP16.17■□□□□ 0.18
RIOK3-208ENST00000584052 ATP6V1DQ9Y5K8 247 aa16.17■□□□□ 0.18
RIOK3-208ENST00000584052 A0A087X0B3 334 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.16■□□□□ 0.18
RIOK3-208ENST00000584052 FRMD3A2A2Y4 597 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 TRIM66O15016 1216 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 AKAP3O75969 853 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 CYP2J2P51589 502 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 SEC13P55735 322 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 KRT85P78386 507 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 CREB5Q02930 508 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 IFRD2Q12894 506 aaPredicted RBP16.16■□□□□ 0.18
RIOK3-208ENST00000584052 DMC1Q14565 340 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 ZNF77Q15935 545 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 CCDC142Q17RM4 750 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 USP39Q53GS9 565 aaKnown RBP16.16■□□□□ 0.18
RIOK3-208ENST00000584052 C2orf27AQ580R0 203 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 TDRD10Q5VZ19 366 aaKnown RBP16.16■□□□□ 0.18
RIOK3-208ENST00000584052 SYT13Q7L8C5 426 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 TRAPPC11Q7Z392 1133 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 WDR49Q8IV35 697 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 IQUBQ8NA54 791 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 TSTD1Q8NFU3 115 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 SPATA17Q96L03 361 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 PKMYT1Q99640 499 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 CUEDC2Q9H467 287 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 RCOR1Q9UKL0 485 aa16.16■□□□□ 0.18
RIOK3-208ENST00000584052 TPRP12270 2363 aaKnown RBP16.16■□□□□ 0.18
RIOK3-208ENST00000584052 CLIC2O15247 247 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 TADA3O75528 432 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 PPP3CCP48454 512 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 NUCB2P80303 420 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 SNRNP35Q16560 246 aaKnown RBP16.15■□□□□ 0.18
RIOK3-208ENST00000584052 EML3Q32P44 896 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 WDR72Q3MJ13 1102 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 MDH1BQ5I0G3 518 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 NAIF1Q69YI7 327 aaPredicted RBP16.15■□□□□ 0.18
RIOK3-208ENST00000584052 SHC4Q6S5L8 630 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 CXorf38Q8TB03 319 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 RIN3Q8TB24 985 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 MYCBPAPQ8TBZ2 947 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 SLITRK1Q96PX8 696 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 VPS45Q9NRW7 570 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 GCNT4Q9P109 453 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 NXF1Q9UBU9 619 aaKnown RBP16.15■□□□□ 0.18
RIOK3-208ENST00000584052 ARHGAP26Q9UNA1 814 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 INVSQ9Y283 1065 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 PCDHGA5Q9Y5G8 931 aa16.15■□□□□ 0.18
RIOK3-208ENST00000584052 KIF26AQ9ULI4 1882 aaPredicted RBP16.14■□□□□ 0.17
RIOK3-208ENST00000584052 A8MXQ7 604 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 LEFTY2O00292 366 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 SLC9A3R1O14745 358 aaPredicted RBP16.14■□□□□ 0.17
RIOK3-208ENST00000584052 EPN2O95208 641 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 CST3P01034 146 aaPredicted RBP16.14■□□□□ 0.17
RIOK3-208ENST00000584052 PTPN1P18031 435 aaKnown RBP16.14■□□□□ 0.17
RIOK3-208ENST00000584052 WARSP23381 471 aaKnown RBP16.14■□□□□ 0.17
RIOK3-208ENST00000584052 MPLP40238 635 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 RAP1GAPP47736 663 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 ME1P48163 572 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 PLK5Q496M5 336 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 FAM26FQ5R3K3 315 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 STPG1Q5TH74 334 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 RNF43Q68DV7 783 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 NELFCDQ8IXH7 590 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 GLIS3Q8NEA6 775 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 KBTBD7Q8WVZ9 684 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 PCED1BQ96HM7 432 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 ZC3H10Q96K80 434 aaKnown RBP16.14■□□□□ 0.17
RIOK3-208ENST00000584052 CEP295NLQ96MC4 621 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 TRIM9Q9C026 710 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 SMOC1Q9H4F8 434 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 CRTAC1Q9NQ79 661 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 SMPD4Q9NXE4 827 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 PCDHA7Q9UN72 937 aa16.14■□□□□ 0.17
RIOK3-208ENST00000584052 TSC2P49815 1807 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 F8VP50 259 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 DCLK1O15075 740 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 EIF3DO15371 548 aaKnown RBP eCLIP16.13■□□□□ 0.17
RIOK3-208ENST00000584052 MAP3K13O43283 966 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 CAVIN2O95810 425 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 PFKLP17858 780 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 E2F4Q16254 413 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 RESP18Q5W5W9 173 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 CCDC33Q8N5R6 958 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 XXYLT1Q8NBI6 393 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 ZNF507Q8TCN5 953 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 SPATA32Q96LK8 384 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 MRPL45Q9BRJ2 306 aaKnown RBP16.13■□□□□ 0.17
RIOK3-208ENST00000584052 MED10Q9BTT4 135 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 KBTBD4Q9NVX7 518 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 PTPRJQ12913 1337 aa16.13■□□□□ 0.17
RIOK3-208ENST00000584052 ZNF840PA6NDX5 716 aa16.12■□□□□ 0.17
RIOK3-208ENST00000584052 EXOC3O60645 756 aa16.12■□□□□ 0.17
RIOK3-208ENST00000584052 ALDH1A2O94788 518 aa16.12■□□□□ 0.17
RIOK3-208ENST00000584052 MBL2P11226 248 aaPredicted RBP16.12■□□□□ 0.17
RIOK3-208ENST00000584052 LIMK1P53667 647 aa16.12■□□□□ 0.17
RIOK3-208ENST00000584052 USP46P62068 366 aa16.12■□□□□ 0.17
RIOK3-208ENST00000584052 SNRPFP62306 86 aaKnown RBP16.12■□□□□ 0.17
RIOK3-208ENST00000584052 TAF10Q12962 218 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms