RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 CHRDL2Q6WN34 429 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 PIGZQ86VD9 579 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 ZMIZ2Q8NF64 920 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 TCF25Q9BQ70 676 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 UBXN6Q9BZV1 441 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 LACRTQ9GZZ8 138 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 THAP2Q9H0W7 228 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 NGRNQ9NPE2 291 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 WDR35Q9P2L0 1181 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 AFF4Q9UHB7 1163 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 MTUS1Q9ULD2 1270 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 MAFFQ9ULX9 164 aa17.65■□□□□ 0.42
CDK5RAP3-230ENST00000584042 LAMA2P24043 3122 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 TULP2O00295 520 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 VNN2O95498 520 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ERBB2P04626 1255 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 CYP1A2P05177 515 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 OR1D2P34982 312 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 CACNA2D1P54289 1103 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ARPP19P56211 112 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 MAP3K7CLP57077 242 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 GPC5P78333 572 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 MLLT1Q03111 559 aaPredicted RBP17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 TCEAL1Q15170 157 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 PDE12Q6L8Q7 609 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 PMF1Q6P1K2 205 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 TMC7Q7Z402 723 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 TMEM110Q86TL2 294 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 DNAAF5Q86Y56 855 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ZDHHC17Q8IUH5 632 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 RHOT2Q8IXI1 618 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 C3orf20Q8ND61 904 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 AUTS2Q8WXX7 1259 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 C18orf8Q96DM3 657 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 C8orf48Q96LL4 319 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 PGLYRP2Q96PD5 576 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 RHOBTB2Q9BYZ6 727 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 LMAN2LQ9H0V9 348 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 SYNCQ9H7C4 482 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ALG13Q9NP73 1137 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ST7Q9NRC1 585 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 TMEM30AQ9NV96 361 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 TRMT1Q9NXH9 659 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 UVRAGQ9P2Y5 699 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 CNOT8Q9UFF9 292 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 SCINQ9Y6U3 715 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 PLXNA3P51805 1871 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 MYO16Q9Y6X6 1858 aa17.64■□□□□ 0.41
CDK5RAP3-230ENST00000584042 A0A0U1RQJ8 604 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 E5RJQ4 531 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 F8VP50 259 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 TEX28O15482 410 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ATMINO43313 823 aaPredicted RBP17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 BEST1O76090 585 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 MTA2O94776 668 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ABLIM3O94929 683 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ADH1AP07327 375 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 RRM1P23921 792 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 SCNN1AP37088 669 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 GPM6BQ13491 265 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 RAB41Q5JT25 222 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 PLEKHA7Q6IQ23 1121 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 RNF19BQ6ZMZ0 732 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 XYLT1Q86Y38 959 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 C17orf53Q8N3J3 647 aaPredicted RBP17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ZNF461Q8TAF7 563 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ATRIPQ8WXE1 791 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ARHGEF26Q96DR7 871 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 CALR3Q96L12 384 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 CEP295NLQ96MC4 621 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 EMILIN2Q9BXX0 1053 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 SLC28A3Q9HAS3 691 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 TFR2Q9UP52 801 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 RANBP2P49792 3224 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 CHD9Q3L8U1 2897 aa17.63■□□□□ 0.41
CDK5RAP3-230ENST00000584042 TCRBV5S1A1TA0A578 114 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ESPNB1AK53 854 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 HHLA1C9JL84 531 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 GRM6O15303 877 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 LPXNO60711 386 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 C1RP00736 705 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 CNPP09543 421 aaKnown RBP17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 HAPLN1P10915 354 aaPredicted RBP17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ATF2P15336 505 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 CYP2F1P24903 491 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 DNAJB1P25685 340 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 RGS7P49802 495 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 HADHBP55084 474 aaKnown RBP17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ERVFC1P60507 584 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 CYP4A22Q5TCH4 519 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 PLPP4Q5VZY2 271 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 DNAJC24Q6P3W2 148 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 ATAD1Q8NBU5 361 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 TIFAQ96CG3 184 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 MCRS1Q96EZ8 462 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 MRPL47Q9HD33 250 aaKnown RBP17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 LZTFL1Q9NQ48 299 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 TJP2Q9UDY2 1190 aa17.62■□□□□ 0.41
CDK5RAP3-230ENST00000584042 TRIM10Q9UDY6 481 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms