RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 SLC30A5Q8TAD4 765 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 OLIG1Q8TAK6 271 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 SLC35F5Q8WV83 523 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 SPATA17Q96L03 361 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 HSFY1Q96LI6 401 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 CHP1Q99653 195 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 SEPT5Q99719 369 aaPredicted RBP12.32□□□□□ -0.44
CDRT1-207ENST00000583965 SMOQ99835 787 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 NHEJ1Q9H9Q4 299 aaPredicted RBP12.32□□□□□ -0.44
CDRT1-207ENST00000583965 SEPT11Q9NVA2 429 aaKnown RBP12.32□□□□□ -0.44
CDRT1-207ENST00000583965 SLC27A5Q9Y2P5 690 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 HCFC2Q9Y5Z7 792 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 MTCH2Q9Y6C9 303 aa12.32□□□□□ -0.44
CDRT1-207ENST00000583965 SZT2Q5T011 3432 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 ESPNB1AK53 854 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 F8VP50 259 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 DDX3XO00571 662 aaKnown RBP eCLIP12.31□□□□□ -0.44
CDRT1-207ENST00000583965 PER2O15055 1255 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 AKR1B10O60218 316 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 CFHP08603 1231 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 SRGAP2BP0DMP2 458 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 UNGP13051 313 aaPredicted RBP12.31□□□□□ -0.44
CDRT1-207ENST00000583965 EPCAMP16422 314 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 CYLC1P35663 651 aaPredicted RBP12.31□□□□□ -0.44
CDRT1-207ENST00000583965 ACADSBP45954 432 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 EPHB3P54753 998 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 CENPCQ03188 943 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 KCNC3Q14003 757 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 VEPH1Q14D04 833 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 SLC18A3Q16572 532 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 CLEC16AQ2KHT3 1053 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 ASTE1Q2TB18 679 aaPredicted RBP12.31□□□□□ -0.44
CDRT1-207ENST00000583965 TCEAL5Q5H9L2 206 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 RBM23Q86U06 439 aaKnown RBP12.31□□□□□ -0.44
CDRT1-207ENST00000583965 TMEM139Q8IV31 216 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 PASD1Q8IV76 773 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 SCN4BQ8IWT1 228 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 TTC9BQ8N6N2 239 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 EFHBQ8N7U6 833 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 ZMIZ2Q8NF64 920 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 UBA3Q8TBC4 463 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 KCTD13Q8WZ19 329 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 CASP10Q92851 521 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 SECISBP2LQ93073 1101 aaKnown RBP12.31□□□□□ -0.44
CDRT1-207ENST00000583965 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.31□□□□□ -0.44
CDRT1-207ENST00000583965 RHOBTB2Q9BYZ6 727 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 MIS12Q9H081 205 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 CRISPLD1Q9H336 500 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 MAN1C1Q9NR34 630 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 TMEM30AQ9NV96 361 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 DZANK1Q9NVP4 752 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 COMMD8Q9NX08 183 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 ZDHHC7Q9NXF8 308 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 EHD2Q9NZN4 543 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 ADAMTS1Q9UHI8 967 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 YIPF1Q9Y548 306 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 ASB3Q9Y575 518 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 INSL5Q9Y5Q6 135 aa12.31□□□□□ -0.44
CDRT1-207ENST00000583965 A0A087X0T9 212 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 HHLA1C9JL84 531 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 ZMYND10O75800 440 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 BEST1O76090 585 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 RTN3O95197 1032 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-207ENST00000583965 LRG1P02750 347 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 C8AP07357 584 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 POU2F2P09086 479 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 HNRNPA1P09651 372 aaKnown RBP eCLIP12.3□□□□□ -0.44
CDRT1-207ENST00000583965 SPATA31D3P0C874 917 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 FAM228BP0C875 321 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 CSH1P0DML2 217 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 CSH2P0DML3 217 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 IGFBP4P22692 258 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 SSTR3P32745 418 aaPredicted RBP12.3□□□□□ -0.44
CDRT1-207ENST00000583965 NSFP46459 744 aaKnown RBP12.3□□□□□ -0.44
CDRT1-207ENST00000583965 RPL34P49207 117 aaKnown RBP12.3□□□□□ -0.44
CDRT1-207ENST00000583965 KIF11P52732 1056 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 CACNA2D1P54289 1103 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 HYAL1Q12794 435 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 PDCLQ13371 301 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 ADGRE1Q14246 886 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 RAB41Q5JT25 222 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 PPM1LQ5SGD2 360 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 NAA35Q5VZE5 725 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 ACAD10Q6JQN1 1059 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 TMEM184AQ6ZMB5 413 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 SPATA31D4Q6ZUB0 917 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 ITIH5Q86UX2 942 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 PIGZQ86VD9 579 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 WDTC1Q8N5D0 677 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 C1orf131Q8NDD1 294 aaKnown RBP12.3□□□□□ -0.44
CDRT1-207ENST00000583965 SLC7A14Q8TBB6 771 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 VCPIP1Q96JH7 1222 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 FAM161BQ96MY7 647 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 KCNK16Q96T55 309 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 PCDHB18PQ96TA0 734 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 SLC4A5Q9BY07 1137 aa12.3□□□□□ -0.44
CDRT1-207ENST00000583965 HELZP42694 1942 aaKnown RBP12.29□□□□□ -0.44
CDRT1-207ENST00000583965 TNFRSF10BO14763 440 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 ARHGAP6O43182 974 aa12.29□□□□□ -0.44
CDRT1-207ENST00000583965 RTN2O75298 545 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms