RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 TPRG1Q6ZUI0 275 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 YAF2Q8IY57 180 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 FBXL13Q8NEE6 735 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 TAS1R2Q8TE23 839 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 OVCA2Q8WZ82 227 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 CEP63Q96MT8 703 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 LRRC3BQ96PB8 259 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 B3GNT5Q9BYG0 378 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 FOXQ1Q9C009 403 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 SDCBP2Q9H190 292 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 DPEP3Q9H4B8 488 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 CSNK1G1Q9HCP0 422 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 COMMD8Q9NX08 183 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 IL37Q9NZH6 218 aa10.53□□□□□ -0.72
SKA2-208ENST00000583927 MAGED2Q9UNF1 606 aaPredicted RBP10.53□□□□□ -0.72
SKA2-208ENST00000583927 PTPRZ1P23471 2315 aaPredicted RBP10.52□□□□□ -0.72
SKA2-208ENST00000583927 FAM170BA6NMN3 283 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 F8VP50 259 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 GADD45BO75293 160 aaPredicted RBP10.52□□□□□ -0.73
SKA2-208ENST00000583927 RTN3O95197 1032 aaPredicted RBP10.52□□□□□ -0.73
SKA2-208ENST00000583927 USP17L7P0C7H9 530 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 TRIM49P0CI25 452 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 TRIM49CP0CI26 452 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 GCLMP48507 274 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 MXI1P50539 228 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 MORC3Q14149 939 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 ANGPT1Q15389 498 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 ZNF528Q3MIS6 628 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 SDHAF4Q5VUM1 108 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 SNX30Q5VWJ9 437 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 TXNDC8Q6A555 127 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 CLEC17AQ6ZS10 378 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 PAQR9Q6ZVX9 377 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 FRMD5Q7Z6J6 570 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 FILIP1Q7Z7B0 1213 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 RALGPS2Q86X27 583 aaPredicted RBP10.52□□□□□ -0.73
SKA2-208ENST00000583927 C1orf210Q8IVY1 113 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 SCN4BQ8IWT1 228 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 FUKQ8N0W3 1084 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 NUP93Q8N1F7 819 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 MAB21L3Q8N8X9 362 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 TRIML1Q8N9V2 468 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 CCDC150Q8NCX0 1101 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 CSGALNACT1Q8TDX6 532 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 USP13Q92995 863 aaPredicted RBP10.52□□□□□ -0.73
SKA2-208ENST00000583927 SMARCD1Q96GM5 515 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 FAM83CQ9BQN1 747 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 DNAI2Q9GZS0 605 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 NIF3L1Q9GZT8 377 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 APOBEC3GQ9HC16 384 aaKnown RBP10.52□□□□□ -0.73
SKA2-208ENST00000583927 METTL14Q9HCE5 456 aaKnown RBP10.52□□□□□ -0.73
SKA2-208ENST00000583927 TMEM30AQ9NV96 361 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 THG1LQ9NWX6 298 aaKnown RBP10.52□□□□□ -0.73
SKA2-208ENST00000583927 GCNT4Q9P109 453 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 MAN1B1Q9UKM7 699 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 PIAS3Q9Y6X2 628 aa10.52□□□□□ -0.73
SKA2-208ENST00000583927 DMXL1Q9Y485 3027 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 TRAV19A0A0A6YYK7 116 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 BICDL2A1A5D9 508 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 H0Y858 1186 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 TNFRSF10BO14763 440 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 CILPO75339 1184 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 OLFM2O95897 454 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 DCNP07585 359 aaKnown RBP10.51□□□□□ -0.73
SKA2-208ENST00000583927 BMP6P22004 513 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 TARSP26639 723 aaKnown RBP10.51□□□□□ -0.73
SKA2-208ENST00000583927 RAP1GAPP47736 663 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 CDR1P51861 262 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 NDST1P52848 882 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 PMS1P54277 932 aaKnown RBP10.51□□□□□ -0.73
SKA2-208ENST00000583927 USP4Q13107 963 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 TTI2Q6NXR4 508 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 SCARA5Q6ZMJ2 495 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 FAM35AQ86V20 835 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 PDZD8Q8NEN9 1154 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 ATOH1Q92858 354 aaPredicted RBP10.51□□□□□ -0.73
SKA2-208ENST00000583927 ERCC4Q92889 916 aaPredicted RBP10.51□□□□□ -0.73
SKA2-208ENST00000583927 SLC35C1Q96A29 364 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 SLITRK1Q96PX8 696 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 HNRNPABQ99729 332 aaKnown RBP10.51□□□□□ -0.73
SKA2-208ENST00000583927 DUSP9Q99956 384 aaKnown RBP10.51□□□□□ -0.73
SKA2-208ENST00000583927 NT5C1AQ9BXI3 368 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 ZNF518BQ9C0D4 1074 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 SEMA4AQ9H3S1 761 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 PNPLA8Q9NP80 782 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 DMAP1Q9NPF5 467 aaPredicted RBP10.51□□□□□ -0.73
SKA2-208ENST00000583927 RAB20Q9NX57 234 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 TRPM5Q9NZQ8 1165 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 ARMCX3Q9UH62 379 aaPredicted RBP10.51□□□□□ -0.73
SKA2-208ENST00000583927 FBXO4Q9UKT5 387 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 ARHGAP26Q9UNA1 814 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 MTF2Q9Y483 593 aaPredicted RBP10.51□□□□□ -0.73
SKA2-208ENST00000583927 OTOGLQ3ZCN5 2332 aa10.51□□□□□ -0.73
SKA2-208ENST00000583927 EML5Q05BV3 1969 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 RALGAPA1Q6GYQ0 2036 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 TRIM49BA6NDI0 452 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 ZNF840PA6NDX5 716 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 PPP1R3GB7ZBB8 358 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 CLDN5O00501 218 aa10.5□□□□□ -0.73
SKA2-208ENST00000583927 OAS1P00973 400 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms