RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 ALDH1A3P47895 512 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 CACNA2D1P54289 1103 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 MAP3K7CLP57077 242 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 SLC8A3P57103 927 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 CDR2Q01850 454 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 CCDC85BQ15834 202 aaPredicted RBP11.58□□□□□ -0.56
TOP3A-216ENST00000583804 DDR2Q16832 855 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 DENND1BQ6P3S1 775 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 ELMSAN1Q6PJG2 1045 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 VSTM1Q6UX27 236 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 TCEAL8Q8IYN2 117 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 ANKRD52Q8NB46 1076 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 PPM1EQ8WY54 764 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 GUCD1Q96NT3 240 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 KCNK16Q96T55 309 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 DUSP16Q9BY84 665 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 PLEKHA4Q9H4M7 779 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 MTMR10Q9NXD2 777 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 TAS2R14Q9NYV8 317 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 TRIM10Q9UDY6 481 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 ADAMTS1Q9UHI8 967 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 NOCTQ9UK39 431 aaKnown RBP11.58□□□□□ -0.56
TOP3A-216ENST00000583804 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.58□□□□□ -0.56
TOP3A-216ENST00000583804 REXO2Q9Y3B8 237 aaKnown RBP11.58□□□□□ -0.56
TOP3A-216ENST00000583804 EPN1Q9Y6I3 576 aaPredicted RBP11.58□□□□□ -0.56
TOP3A-216ENST00000583804 CDH23Q9H251 3354 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 F8VP50 259 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 ZNF263O14978 683 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 LINC01565O15544 149 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 BEST1O76090 585 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 LRG1P02750 347 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 SRGAP2BP0DMP2 458 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 NPR3P17342 541 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 ANXA13P27216 316 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 PRKCIP41743 596 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 MAGEA11P43364 429 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 GPR15P49685 360 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 BCAT1P54687 386 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 RPL10AP62906 217 aaKnown RBP11.57□□□□□ -0.56
TOP3A-216ENST00000583804 FMO1Q01740 532 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 PDE4CQ08493 712 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 TWF1Q12792 350 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 PPM1LQ5SGD2 360 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 SDHAF4Q5VUM1 108 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 PHLDB2Q86SQ0 1253 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 KIAA1328Q86T90 577 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 TTC30AQ86WT1 665 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 ZNF677Q86XU0 584 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 EFHBQ8N7U6 833 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 VN1R2Q8NFZ6 395 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 OLIG1Q8TAK6 271 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 GPR152Q8TDT2 470 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 GIPC2Q8TF65 315 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 DDX1Q92499 740 aaKnown RBP11.57□□□□□ -0.56
TOP3A-216ENST00000583804 CASP10Q92851 521 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 PCDHB18PQ96TA0 734 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 SMOQ99835 787 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 PACSIN1Q9BY11 444 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 DMAP1Q9NPF5 467 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-216ENST00000583804 CLDND1Q9NY35 253 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 HSFX1Q9UBD0 423 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 YIPF1Q9Y548 306 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 CEP83Q9Y592 693 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 INSL5Q9Y5Q6 135 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 DYNC1I1O14576 645 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 TRIM66O15016 1216 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 NCK2O43639 380 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 RFPL2O75678 378 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 EPHB3P54753 998 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 BST2Q10589 180 aaKnown RBP11.57□□□□□ -0.56
TOP3A-216ENST00000583804 SKIV2LQ15477 1246 aaKnown RBP11.57□□□□□ -0.56
TOP3A-216ENST00000583804 TAF12Q16514 161 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 CCDC122Q5T0U0 273 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 CLEC20AQ6ZU45 233 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 C12orf76Q8N812 135 aaPredicted RBP11.57□□□□□ -0.56
TOP3A-216ENST00000583804 SLC30A5Q8TAD4 765 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 HDAC7Q8WUI4 952 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 SECISBP2LQ93073 1101 aaKnown RBP11.57□□□□□ -0.56
TOP3A-216ENST00000583804 C8orf48Q96LL4 319 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 LZTFL1Q9NQ48 299 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 TMEM30AQ9NV96 361 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 PCDHGC3Q9UN70 934 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 PPP2R2CQ9Y2T4 447 aa11.57□□□□□ -0.56
TOP3A-216ENST00000583804 BZW2Q9Y6E2 419 aaKnown RBP11.57□□□□□ -0.56
TOP3A-216ENST00000583804 PRRC2BQ5JSZ5 2229 aaKnown RBP11.56□□□□□ -0.56
TOP3A-216ENST00000583804 SSU72P8A0A1W2PR75 194 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 TULP2O00295 520 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 PIK3R2O00459 728 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 CCL16O15467 120 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 ATMINO43313 823 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-216ENST00000583804 RRP9O43818 475 aaKnown RBP11.56□□□□□ -0.56
TOP3A-216ENST00000583804 ZMYND10O75800 440 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 SETSIPP0DME0 302 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 ABCB4P21439 1286 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 RGS7P49802 495 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 CDK17Q00537 523 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 IFRD2Q12894 506 aaPredicted RBP11.56□□□□□ -0.56
TOP3A-216ENST00000583804 PLD1Q13393 1074 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 ADAM15Q13444 863 aa11.56□□□□□ -0.56
TOP3A-216ENST00000583804 KCNC3Q14003 757 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms