RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 ARHGAP18Q8N392 663 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 EPS8L1Q8TE68 723 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 SLC35F5Q8WV83 523 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 VCPIP1Q96JH7 1222 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 DNAJC7Q99615 494 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 PDCL3Q9H2J4 239 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 UBE2ZQ9H832 354 aaPredicted RBP9.85□□□□□ -0.83
UBBP4-201ENST00000583708 CLDND1Q9NY35 253 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 HMGXB4Q9UGU5 601 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 CD207Q9UJ71 328 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 TSPAN16Q9UKR8 245 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 YIPF1Q9Y548 306 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 PCDHGC5Q9Y5F6 944 aa9.85□□□□□ -0.83
UBBP4-201ENST00000583708 SSU72P8A0A1W2PR75 194 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 TNFRSF10BO14763 440 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 ADCY5O95622 1261 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 GLP2RO95838 553 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 CCDC130P13994 396 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 WEE1P30291 646 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 CDC25CP30307 473 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 LTBRP36941 435 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 SCNN1AP37088 669 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 GPD2P43304 727 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 KIF11P52732 1056 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 APBA1Q02410 837 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 KLHL30Q0D2K2 578 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 TWF1Q12792 350 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 SMAD4Q13485 552 aaKnown RBP9.84□□□□□ -0.83
UBBP4-201ENST00000583708 RAB41Q5JT25 222 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 SNX30Q5VWJ9 437 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 PM20D1Q6GTS8 502 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 SYCE2Q6PIF2 218 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 CLEC20AQ6ZU45 233 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 BEND5Q7L4P6 421 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 TMC6Q7Z403 805 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 TMEM110Q86TL2 294 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 SLC47A2Q86VL8 602 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 MON1AQ86VX9 555 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 GLYCTKQ8IVS8 523 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 SCN4BQ8IWT1 228 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 KIAA1958Q8N8K9 716 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 SMRP1Q8NCR6 262 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 C1orf131Q8NDD1 294 aaKnown RBP9.84□□□□□ -0.83
UBBP4-201ENST00000583708 MAFAQ8NHW3 353 aaPredicted RBP9.84□□□□□ -0.83
UBBP4-201ENST00000583708 IRGQQ8WZA9 623 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 TFAP2BQ92481 460 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 DDX1Q92499 740 aaKnown RBP9.84□□□□□ -0.83
UBBP4-201ENST00000583708 SMG7Q92540 1137 aaKnown RBP9.84□□□□□ -0.83
UBBP4-201ENST00000583708 ELMO3Q96BJ8 720 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 PGLYRP2Q96PD5 576 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 SLITRK1Q96PX8 696 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 GCNAQ96QF7 691 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 PANX2Q96RD6 677 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 CDK5RAP1Q96SZ6 601 aaKnown RBP9.84□□□□□ -0.83
UBBP4-201ENST00000583708 SEPT5Q99719 369 aaPredicted RBP9.84□□□□□ -0.83
UBBP4-201ENST00000583708 SMOQ99835 787 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 S1PR5Q9H228 398 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 PIDD1Q9HB75 910 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 CNGB3Q9NQW8 809 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 ASAH2Q9NR71 780 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 KRT82Q9NSB4 513 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 FAM49BQ9NUQ9 324 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.84□□□□□ -0.83
UBBP4-201ENST00000583708 CLEC1BQ9P126 229 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 NOCTQ9UK39 431 aaKnown RBP9.84□□□□□ -0.83
UBBP4-201ENST00000583708 USTQ9Y2C2 406 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 SLC27A5Q9Y2P5 690 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 USP3Q9Y6I4 520 aa9.84□□□□□ -0.83
UBBP4-201ENST00000583708 LRRC53A6NM62 1247 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 SLC38A8A6NNN8 435 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 F8VP50 259 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 AP5Z1O43299 807 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 GLI1P08151 1106 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 SPATA31D3P0C874 917 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 TNFAIP3P21580 790 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 BRD2P25440 801 aaKnown RBP9.83□□□□□ -0.84
UBBP4-201ENST00000583708 YWHAQP27348 245 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 ADORA2BP29275 332 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 CASP14P31944 242 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 MAP3K7CLP57077 242 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 PDE4CQ08493 712 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 SKIV2LQ15477 1246 aaKnown RBP9.83□□□□□ -0.84
UBBP4-201ENST00000583708 GOLGA7BQ2TAP0 167 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 C10orf76Q5T2E6 689 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 LLGL2Q6P1M3 1020 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 SPATA31D4Q6ZUB0 917 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 ARCQ7LC44 396 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 CCDC186Q7Z3E2 898 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 TADA2BQ86TJ2 420 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 TTC30AQ86WT1 665 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 STKLD1Q8NE28 680 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 ATXN2LQ8WWM7 1075 aaKnown RBP9.83□□□□□ -0.84
UBBP4-201ENST00000583708 SUSD6Q92537 303 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 ZNF707Q96C28 371 aaPredicted RBP9.83□□□□□ -0.84
UBBP4-201ENST00000583708 AGPAT1Q99943 283 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 SLC4A5Q9BY07 1137 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 CRISPLD1Q9H336 500 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 LRRC4Q9HBW1 653 aa9.83□□□□□ -0.84
UBBP4-201ENST00000583708 WDR6Q9NNW5 1121 aaKnown RBP9.83□□□□□ -0.84
UBBP4-201ENST00000583708 CLIC5Q9NZA1 410 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms