RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 EPHB3P54753 998 aa26.46■■□□□ 1.83
TSEN54-209ENST00000583454 PSMC1P62191 440 aaKnown RBP26.46■■□□□ 1.83
TSEN54-209ENST00000583454 KCNH2Q12809 1159 aa26.46■■□□□ 1.83
TSEN54-209ENST00000583454 KLHL40Q2TBA0 621 aa26.46■■□□□ 1.83
TSEN54-209ENST00000583454 CFAP221Q4G0U5 840 aa26.46■■□□□ 1.83
TSEN54-209ENST00000583454 GAREM2Q75VX8 874 aa26.46■■□□□ 1.83
TSEN54-209ENST00000583454 MFSD6LQ8IWD5 586 aa26.46■■□□□ 1.83
TSEN54-209ENST00000583454 MYCBPAPQ8TBZ2 947 aa26.46■■□□□ 1.83
TSEN54-209ENST00000583454 IRF7Q92985 503 aa26.46■■□□□ 1.83
TSEN54-209ENST00000583454 FUBP3Q96I24 572 aaKnown RBP eCLIP26.46■■□□□ 1.83
TSEN54-209ENST00000583454 PRMT8Q9NR22 394 aaPredicted RBP26.46■■□□□ 1.83
TSEN54-209ENST00000583454 ASB3Q9Y575 518 aa26.46■■□□□ 1.83
TSEN54-209ENST00000583454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.46■■□□□ 1.83
TSEN54-209ENST00000583454 PTPRDP23468 1912 aa26.45■■□□□ 1.83
TSEN54-209ENST00000583454 HEPACAM2A8MVW5 462 aa26.45■■□□□ 1.82
TSEN54-209ENST00000583454 INCA1Q0VD86 236 aa26.45■■□□□ 1.82
TSEN54-209ENST00000583454 TPD52L1Q16890 204 aaPredicted RBP26.45■■□□□ 1.82
TSEN54-209ENST00000583454 MGAT5BQ3V5L5 792 aa26.45■■□□□ 1.82
TSEN54-209ENST00000583454 WDR44Q5JSH3 913 aa26.45■■□□□ 1.82
TSEN54-209ENST00000583454 CAVIN1Q6NZI2 390 aaKnown RBP26.45■■□□□ 1.82
TSEN54-209ENST00000583454 C4orf50Q6ZRC1 276 aa26.45■■□□□ 1.82
TSEN54-209ENST00000583454 UNC93AQ86WB7 457 aa26.45■■□□□ 1.82
TSEN54-209ENST00000583454 ZBTB44Q8NCP5 570 aa26.45■■□□□ 1.82
TSEN54-209ENST00000583454 PSMG2Q969U7 264 aa26.45■■□□□ 1.82
TSEN54-209ENST00000583454 GPR88Q9GZN0 384 aa26.45■■□□□ 1.82
TSEN54-209ENST00000583454 DPEP3Q9H4B8 488 aa26.45■■□□□ 1.82
TSEN54-209ENST00000583454 AFPP02771 609 aaKnown RBP26.44■■□□□ 1.82
TSEN54-209ENST00000583454 ATF6P18850 670 aa26.44■■□□□ 1.82
TSEN54-209ENST00000583454 CSTF1Q05048 431 aaKnown RBP26.44■■□□□ 1.82
TSEN54-209ENST00000583454 STX1AQ16623 288 aa26.44■■□□□ 1.82
TSEN54-209ENST00000583454 DNAJB7Q7Z6W7 309 aaPredicted RBP26.44■■□□□ 1.82
TSEN54-209ENST00000583454 SPATA2LQ8IUW3 424 aaPredicted RBP26.44■■□□□ 1.82
TSEN54-209ENST00000583454 CRYBG2Q8N1P7 616 aa26.44■■□□□ 1.82
TSEN54-209ENST00000583454 B3GALNT2Q8NCR0 500 aa26.44■■□□□ 1.82
TSEN54-209ENST00000583454 ENOX1Q8TC92 643 aaKnown RBP26.44■■□□□ 1.82
TSEN54-209ENST00000583454 TATDN2Q93075 761 aa26.44■■□□□ 1.82
TSEN54-209ENST00000583454 MYLPFQ96A32 169 aa26.44■■□□□ 1.82
TSEN54-209ENST00000583454 LRRC3BQ96PB8 259 aa26.44■■□□□ 1.82
TSEN54-209ENST00000583454 SEPT5Q99719 369 aaPredicted RBP26.44■■□□□ 1.82
TSEN54-209ENST00000583454 MRPS17Q9Y2R5 130 aaKnown RBP26.44■■□□□ 1.82
TSEN54-209ENST00000583454 NCAM2O15394 837 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 TDGF1P13385 188 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 CYP2F1P24903 491 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 MAGEA11P43364 429 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 NDST1P52848 882 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 FCHO2Q0JRZ9 810 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 MTAPQ13126 283 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 MDH1BQ5I0G3 518 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 LMO3Q8TAP4 145 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 PCED1BQ96HM7 432 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 TNIP3Q96KP6 325 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 LPIN3Q9BQK8 851 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 CHRDQ9H2X0 955 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 FAM124BQ9H5Z6 455 aaPredicted RBP26.43■■□□□ 1.82
TSEN54-209ENST00000583454 MAGEC2Q9UBF1 373 aaPredicted RBP26.43■■□□□ 1.82
TSEN54-209ENST00000583454 NDRG2Q9UN36 371 aaKnown RBP26.43■■□□□ 1.82
TSEN54-209ENST00000583454 PIAS3Q9Y6X2 628 aa26.43■■□□□ 1.82
TSEN54-209ENST00000583454 MAN2B1O00754 1011 aa26.42■■□□□ 1.82
TSEN54-209ENST00000583454 LILRB5O75023 590 aa26.42■■□□□ 1.82
TSEN54-209ENST00000583454 ID4P47928 161 aa26.42■■□□□ 1.82
TSEN54-209ENST00000583454 CETN1Q12798 172 aa26.42■■□□□ 1.82
TSEN54-209ENST00000583454 TSSK4Q6SA08 328 aa26.42■■□□□ 1.82
TSEN54-209ENST00000583454 FAM114A1Q8IWE2 563 aa26.42■■□□□ 1.82
TSEN54-209ENST00000583454 DCLK2Q8N568 766 aa26.42■■□□□ 1.82
TSEN54-209ENST00000583454 SLITRK6Q9H5Y7 841 aa26.42■■□□□ 1.82
TSEN54-209ENST00000583454 PCDHGA2Q9Y5H1 932 aa26.42■■□□□ 1.82
TSEN54-209ENST00000583454 TYRO3Q06418 890 aa26.41■■□□□ 1.82
TSEN54-209ENST00000583454 VSTM1Q6UX27 236 aa26.41■■□□□ 1.82
TSEN54-209ENST00000583454 C11orf57Q6ZUT1 292 aaPredicted RBP26.41■■□□□ 1.82
TSEN54-209ENST00000583454 ITIH5Q86UX2 942 aa26.41■■□□□ 1.82
TSEN54-209ENST00000583454 ARID3BQ8IVW6 561 aaPredicted RBP26.41■■□□□ 1.82
TSEN54-209ENST00000583454 TTC39CQ8N584 583 aa26.41■■□□□ 1.82
TSEN54-209ENST00000583454 EHBP1Q8NDI1 1231 aa26.41■■□□□ 1.82
TSEN54-209ENST00000583454 WHAMMQ8TF30 809 aa26.41■■□□□ 1.82
TSEN54-209ENST00000583454 RUBCNQ92622 972 aa26.41■■□□□ 1.82
TSEN54-209ENST00000583454 E2F7Q96AV8 911 aa26.41■■□□□ 1.82
TSEN54-209ENST00000583454 IL21Q9HBE4 155 aa26.41■■□□□ 1.82
TSEN54-209ENST00000583454 HMGXB4Q9UGU5 601 aa26.41■■□□□ 1.82
TSEN54-209ENST00000583454 ZNF638Q14966 1978 aaKnown RBP26.4■■□□□ 1.82
TSEN54-209ENST00000583454 ZNF263O14978 683 aa26.4■■□□□ 1.82
TSEN54-209ENST00000583454 CILPO75339 1184 aa26.4■■□□□ 1.82
TSEN54-209ENST00000583454 MLLT6P55198 1093 aaPredicted RBP26.4■■□□□ 1.82
TSEN54-209ENST00000583454 RPL10AP62906 217 aaKnown RBP26.4■■□□□ 1.82
TSEN54-209ENST00000583454 MAMSTRQ6ZN01 415 aa26.4■■□□□ 1.82
TSEN54-209ENST00000583454 ACOT1Q86TX2 421 aa26.4■■□□□ 1.82
TSEN54-209ENST00000583454 GPIHBP1Q8IV16 184 aa26.4■■□□□ 1.82
TSEN54-209ENST00000583454 KIAA2013Q8IYS2 634 aa26.4■■□□□ 1.82
TSEN54-209ENST00000583454 FAM3CQ92520 227 aa26.4■■□□□ 1.82
TSEN54-209ENST00000583454 B3GNT5Q9BYG0 378 aa26.4■■□□□ 1.82
TSEN54-209ENST00000583454 SAMSN1Q9NSI8 373 aaKnown RBP26.4■■□□□ 1.82
TSEN54-209ENST00000583454 ZSCAN32Q9NX65 697 aa26.4■■□□□ 1.82
TSEN54-209ENST00000583454 NFE2L3Q9Y4A8 694 aa26.4■■□□□ 1.82
TSEN54-209ENST00000583454 CHADO15335 359 aa26.39■■□□□ 1.82
TSEN54-209ENST00000583454 BDNFP23560 247 aa26.39■■□□□ 1.82
TSEN54-209ENST00000583454 GABRR2P28476 465 aa26.39■■□□□ 1.82
TSEN54-209ENST00000583454 MTIF2P46199 727 aaKnown RBP26.39■■□□□ 1.82
TSEN54-209ENST00000583454 GPR15P49685 360 aa26.39■■□□□ 1.82
TSEN54-209ENST00000583454 CYP27A1Q02318 531 aa26.39■■□□□ 1.82
TSEN54-209ENST00000583454 CUL2Q13617 745 aa26.39■■□□□ 1.82
TSEN54-209ENST00000583454 VEPH1Q14D04 833 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms