RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 TLR9Q9NR96 1032 aa12.68□□□□□ -0.38
CCDC57-216ENST00000582885 KRT82Q9NSB4 513 aa12.68□□□□□ -0.38
CCDC57-216ENST00000582885 AFF4Q9UHB7 1163 aaKnown RBP12.68□□□□□ -0.38
CCDC57-216ENST00000582885 ANAPC1Q9H1A4 1944 aa12.68□□□□□ -0.38
CCDC57-216ENST00000582885 MYO7AQ13402 2215 aa12.68□□□□□ -0.38
CCDC57-216ENST00000582885 NCANO14594 1321 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 WDR27A2RRH5 827 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 MTMR11A4FU01 709 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 RCCD1A6NED2 376 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 C2CD2LO14523 706 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 FSCN2O14926 492 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 ADAM12O43184 909 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 MTA2O94776 668 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 CXCL14O95715 111 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 CYP1A2P05177 515 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 ATF2P15336 505 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 BDNFP23560 247 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 MSNP26038 577 aaKnown RBP12.67□□□□□ -0.38
CCDC57-216ENST00000582885 SCNN1AP37088 669 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 ARHGAP25P42331 645 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 HADHBP55084 474 aaKnown RBP12.67□□□□□ -0.38
CCDC57-216ENST00000582885 ERVFC1P60507 584 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 ZNF268Q14587 947 aaPredicted RBP12.67□□□□□ -0.38
CCDC57-216ENST00000582885 SMC1AQ14683 1233 aaKnown RBP12.67□□□□□ -0.38
CCDC57-216ENST00000582885 PTPN20Q4JDL3 420 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 RAB41Q5JT25 222 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 MMS22LQ6ZRQ5 1243 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 PIGZQ86VD9 579 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 ZDHHC17Q8IUH5 632 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 RHOT2Q8IXI1 618 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 RNF10Q8N5U6 811 aaKnown RBP12.67□□□□□ -0.38
CCDC57-216ENST00000582885 MRPL43Q8N983 215 aaKnown RBP12.67□□□□□ -0.38
CCDC57-216ENST00000582885 ZMIZ2Q8NF64 920 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 IPO4Q8TEX9 1081 aaKnown RBP12.67□□□□□ -0.38
CCDC57-216ENST00000582885 POF1BQ8WVV4 589 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 C8orf48Q96LL4 319 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 CPXM1Q96SM3 734 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 THAP2Q9H0W7 228 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 NKX2-4Q9H2Z4 354 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 SLC28A3Q9HAS3 691 aa12.67□□□□□ -0.38
CCDC57-216ENST00000582885 ALG13Q9NP73 1137 aaKnown RBP12.67□□□□□ -0.38
CCDC57-216ENST00000582885 HHLA1C9JL84 531 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 TRIM66O15016 1216 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 TEX28O15482 410 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 BEST1O76090 585 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 VNN2O95498 520 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 ADH1AP07327 375 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 HAPLN1P10915 354 aaPredicted RBP12.66□□□□□ -0.38
CCDC57-216ENST00000582885 RPL17P18621 184 aaKnown RBP12.66□□□□□ -0.38
CCDC57-216ENST00000582885 ABCB4P21439 1286 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 CYP2F1P24903 491 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 DNAJB1P25685 340 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 TUFMP49411 452 aaKnown RBP12.66□□□□□ -0.38
CCDC57-216ENST00000582885 MAP3K7CLP57077 242 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 RPL10AP62906 217 aaKnown RBP12.66□□□□□ -0.38
CCDC57-216ENST00000582885 GPM6BQ13491 265 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 ARHGAP29Q52LW3 1261 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 PPP2R2DQ66LE6 453 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 PLEKHA7Q6IQ23 1121 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 RNF19BQ6ZMZ0 732 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 SCML4Q8N228 414 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 C3orf20Q8ND61 904 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 RFFLQ8WZ73 363 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 ZNF653Q96CK0 615 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 MCRS1Q96EZ8 462 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 KCNK16Q96T55 309 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 TCF25Q9BQ70 676 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 C11orf70Q9BRQ4 267 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 EMILIN2Q9BXX0 1053 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 MRPL47Q9HD33 250 aaKnown RBP12.66□□□□□ -0.38
CCDC57-216ENST00000582885 TMEM30AQ9NV96 361 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 PARVAQ9NVD7 372 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 TRMT1Q9NXH9 659 aaKnown RBP12.66□□□□□ -0.38
CCDC57-216ENST00000582885 ABI2Q9NYB9 513 aaPredicted RBP12.66□□□□□ -0.38
CCDC57-216ENST00000582885 CHD7Q9P2D1 2997 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 UVRAGQ9P2Y5 699 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 CNOT8Q9UFF9 292 aaKnown RBP12.66□□□□□ -0.38
CCDC57-216ENST00000582885 SCINQ9Y6U3 715 aa12.66□□□□□ -0.38
CCDC57-216ENST00000582885 TCRBV5S1A1TA0A578 114 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 C2orf71A6NGG8 1288 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 USP27XA6NNY8 438 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 ESPNB1AK53 854 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 E5RJQ4 531 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 TULP2O00295 520 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 GRM6O15303 877 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 LPXNO60711 386 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 GABBR2O75899 941 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 FBXO21O94952 628 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 ERBB2P04626 1255 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 CNPP09543 421 aaKnown RBP12.65□□□□□ -0.38
CCDC57-216ENST00000582885 RRM1P23921 792 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 DNAJB2P25686 324 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 CACNA2D1P54289 1103 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 ARPP19P56211 112 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 CAMK1Q14012 370 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 IFI16Q16666 785 aaKnown RBP12.65□□□□□ -0.38
CCDC57-216ENST00000582885 LRIT3Q3SXY7 679 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 LILRA6Q6PI73 481 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 CHRDL2Q6WN34 429 aa12.65□□□□□ -0.38
CCDC57-216ENST00000582885 RTL10Q7L3V2 364 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms