RNA–Protein interactions for RNA: ENST00000582288.1

TVP23B-210, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-210ENST00000582288 C1QL1O75973 258 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 NOL4O94818 638 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 CKMP06732 381 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 CXCL8P10145 99 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 HNRNPLP14866 589 aaKnown RBP eCLIP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 GNSP15586 552 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 NMT1P30419 496 aaKnown RBP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 KIR2DL1P43626 348 aaPredicted RBP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 RPL10AP62906 217 aaKnown RBP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 POU5F1Q01860 360 aaKnown RBP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 RPL6Q02878 288 aaKnown RBP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 PPP2R3AQ06190 1150 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 SCRN1Q12765 414 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 NR5A1Q13285 461 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 NFE2Q16621 373 aaPredicted RBP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 PREPLQ4J6C6 727 aaPredicted RBP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 SWT1Q5T5J6 900 aaKnown RBP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 DBX2Q6ZNG2 339 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 TRMT11Q7Z4G4 463 aaKnown RBP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 ZNF605Q86T29 641 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 CCDC33Q8N5R6 958 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 KCTD17Q8N5Z5 321 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 FSIP1Q8NA03 581 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 IL17RCQ8NAC3 791 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 TXNDC5Q8NBS9 432 aaKnown RBP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 SPATA18Q8TC71 538 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 GIPC2Q8TF65 315 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 SPIRE2Q8WWL2 714 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 RLN3Q8WXF3 142 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 ZNF419Q96HQ0 510 aaPredicted RBP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 PNKPQ96T60 521 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 CDC6Q99741 560 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 GCNT4Q9P109 453 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 BCCIPQ9P287 314 aaKnown RBP eCLIP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 PCOLCE2Q9UKZ9 415 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 PCDHB5Q9Y5E4 795 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 PCDHGB2Q9Y5G2 931 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 CYP46A1Q9Y6A2 500 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 WNT6Q9Y6F9 365 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 MAST4O15021 2626 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 SDK1Q7Z5N4 2213 aa6.72□□□□□ -1.33
TVP23B-210ENST00000582288 ASCC3Q8N3C0 2202 aaKnown RBP6.72□□□□□ -1.33
TVP23B-210ENST00000582288 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.71□□□□□ -1.34
TVP23B-210ENST00000582288 H0YCG3 227 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 SGK1O00141 431 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 SLC9A3R1O14745 358 aaPredicted RBP6.71□□□□□ -1.34
TVP23B-210ENST00000582288 CAPN9O14815 690 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 TADA3O75528 432 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 KAT7O95251 611 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 APODP05090 189 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 NFICP08651 508 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 CDC25AP30304 524 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 GRIA2P42262 883 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 ABCG1P45844 678 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 SMTNP53814 917 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 SEC13P55735 322 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 CAMK2BQ13554 666 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 PDIA5Q14554 519 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 GAB4Q2WGN9 574 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 PLEKHG6Q3KR16 790 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 SYCP2LQ5T4T6 812 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 C9orf57Q5W0N0 161 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 ARMCX6Q7L4S7 300 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 SLCO6A1Q86UG4 719 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 LRRTM3Q86VH5 581 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 ADGRG2Q8IZP9 1017 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 DAW1Q8N136 415 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 ALLCQ8N6M5 410 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 FRMD1Q8N878 549 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 PNPLA1Q8N8W4 532 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 TMEM161BQ8NDZ6 487 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 BAHD1Q8TBE0 780 aaPredicted RBP6.71□□□□□ -1.34
TVP23B-210ENST00000582288 SH3RF2Q8TEC5 729 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 FOXJ1Q92949 421 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 ZBTB45Q96K62 511 aaPredicted RBP6.71□□□□□ -1.34
TVP23B-210ENST00000582288 CAMK1GQ96NX5 476 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 DUSP9Q99956 384 aaKnown RBP6.71□□□□□ -1.34
TVP23B-210ENST00000582288 TMEM60Q9H2L4 133 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 PRORYQ9H606 182 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 GJB4Q9NTQ9 266 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 STARD13Q9Y3M8 1113 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 PLXNB3Q9ULL4 1909 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 ABCA7Q8IZY2 2146 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 ATXN2Q99700 1313 aaKnown RBP6.71□□□□□ -1.34
TVP23B-210ENST00000582288 TSC2P49815 1807 aa6.71□□□□□ -1.34
TVP23B-210ENST00000582288 OBSL1O75147 1896 aa6.7□□□□□ -1.34
TVP23B-210ENST00000582288 TEX51A0A1B0GUA7 166 aa6.7□□□□□ -1.34
TVP23B-210ENST00000582288 TCRBV21S2A2A0A5A6 115 aa6.7□□□□□ -1.34
TVP23B-210ENST00000582288 TRABD2BA6NFA1 517 aa6.7□□□□□ -1.34
TVP23B-210ENST00000582288 LACTBL1A8MY62 500 aa6.7□□□□□ -1.34
TVP23B-210ENST00000582288 BTBD18B2RXH4 712 aa6.7□□□□□ -1.34
TVP23B-210ENST00000582288 J3QKU1 62 aa6.7□□□□□ -1.34
TVP23B-210ENST00000582288 ZBTB24O43167 697 aaPredicted RBP6.7□□□□□ -1.34
TVP23B-210ENST00000582288 FAM189A1O60320 539 aa6.7□□□□□ -1.34
TVP23B-210ENST00000582288 PFKFB2O60825 505 aa6.7□□□□□ -1.34
TVP23B-210ENST00000582288 ADAM23O75077 832 aa6.7□□□□□ -1.34
TVP23B-210ENST00000582288 REC8O95072 547 aa6.7□□□□□ -1.34
TVP23B-210ENST00000582288 KLF8O95600 359 aaPredicted RBP6.7□□□□□ -1.34
TVP23B-210ENST00000582288 OR52Z1P0C646 297 aa6.7□□□□□ -1.34
TVP23B-210ENST00000582288 MAPTP10636 758 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms