RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 SYCE1Q8N0S2 351 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 C1orf131Q8NDD1 294 aaKnown RBP13.3□□□□□ -0.28
SRSF1-204ENST00000581979 MNS1Q8NEH6 495 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 APPL2Q8NEU8 664 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 FAM193BQ96PV7 902 aaPredicted RBP13.3□□□□□ -0.28
SRSF1-204ENST00000581979 C11orf70Q9BRQ4 267 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 DNAI2Q9GZS0 605 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 SNX25Q9H3E2 840 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 ADAM22Q9P0K1 906 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 UQCRHLA0A096LP55 91 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 CASTOR2A6NHX0 329 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 A8MXQ7 604 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 HUS1O60921 280 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 CYP1A2P05177 515 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 UQCRHP07919 91 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 CLCNKBP51801 687 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 AMPD2Q01433 879 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 DSC1Q08554 894 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 TCEAL1Q15170 157 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 SGO2Q562F6 1265 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 MEI1Q5TIA1 1274 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 LIN9Q5TKA1 542 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 UNC93AQ86WB7 457 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 PHF13Q86YI8 300 aaPredicted RBP13.3□□□□□ -0.28
SRSF1-204ENST00000581979 NUP85Q9BW27 656 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 CARD6Q9BX69 1037 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 ZNF518BQ9C0D4 1074 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 UVRAGQ9P2Y5 699 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 CACNG4Q9UBN1 327 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 MUTYHQ9UIF7 546 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 KIAA1257Q9ULG3 409 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 FAN1Q9Y2M0 1017 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.29□□□□□ -0.28
SRSF1-204ENST00000581979 CYB561D2O14569 222 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 NRP1O14786 923 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 EFEMP2O95967 443 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 RPL9P32969 192 aaKnown RBP13.29□□□□□ -0.28
SRSF1-204ENST00000581979 HADHBP55084 474 aaKnown RBP13.29□□□□□ -0.28
SRSF1-204ENST00000581979 DENND1BQ6P3S1 775 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 MMS22LQ6ZRQ5 1243 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 MON1BQ7L1V2 547 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 COLGALT2Q8IYK4 626 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 ADGRF2Q8IZF7 708 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 TOP6BLQ8N6T0 577 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 LRRC57Q8N9N7 239 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 ZNF564Q8TBZ8 553 aaPredicted RBP13.29□□□□□ -0.28
SRSF1-204ENST00000581979 AUTS2Q8WXX7 1259 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 VCPIP1Q96JH7 1222 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 CHORDC1Q9UHD1 332 aaPredicted RBP13.29□□□□□ -0.28
SRSF1-204ENST00000581979 SNX12Q9UMY4 172 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 HYOU1Q9Y4L1 999 aa13.29□□□□□ -0.28
SRSF1-204ENST00000581979 M0QYV0 167 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 BUB1BO60566 1050 aaPredicted RBP13.28□□□□□ -0.28
SRSF1-204ENST00000581979 LILRB3O75022 631 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 SRGAP2O75044 1071 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 MICAL2O94851 1124 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 RRM1P23921 792 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 CDH5P33151 784 aaPredicted RBP13.28□□□□□ -0.28
SRSF1-204ENST00000581979 GNL1P36915 607 aaPredicted RBP13.28□□□□□ -0.28
SRSF1-204ENST00000581979 ITIH3Q06033 890 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
SRSF1-204ENST00000581979 STILQ15468 1287 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 CNGA2Q16280 664 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 WHAMMP3Q1A5X7 153 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 DSTYKQ6XUX3 929 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 PEX26Q7Z412 305 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 PHLDB2Q86SQ0 1253 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 ACOT1Q86TX2 421 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 SLC22A17Q8WUG5 538 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 KBTBD7Q8WVZ9 684 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 DDX27Q96GQ7 796 aaKnown RBP13.28□□□□□ -0.28
SRSF1-204ENST00000581979 UROC1Q96N76 676 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 LHX5Q9H2C1 402 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 ADAM7Q9H2U9 754 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 GOLPH3Q9H4A6 298 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 AVENQ9NQS1 362 aaPredicted RBP13.28□□□□□ -0.28
SRSF1-204ENST00000581979 MARCH5Q9NX47 278 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 AMFRQ9UKV5 643 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 L1RE1Q9UN81 338 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 PACSIN2Q9UNF0 486 aaPredicted RBP13.28□□□□□ -0.28
SRSF1-204ENST00000581979 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.28□□□□□ -0.285e-6■■□□□ 11.8
SRSF1-204ENST00000581979 HCN4Q9Y3Q4 1203 aa13.28□□□□□ -0.28
SRSF1-204ENST00000581979 TMEM110-MUSTN1A8MSY1 372 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 MTA2O94776 668 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 CALB1P05937 261 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 PDGFRBP09619 1106 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 PRLRP16471 622 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 TCP1P17987 556 aaKnown RBP13.27□□□□□ -0.28
SRSF1-204ENST00000581979 CA8P35219 290 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 DNA2P51530 1060 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 TUSC3Q13454 348 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 RPS6KA1Q15418 735 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 UPP1Q16831 310 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 C2CD6Q53TS8 623 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 SLFN11Q7Z7L1 901 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 ERICH1Q86X53 443 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 RNF168Q8IYW5 571 aaPredicted RBP13.27□□□□□ -0.28
SRSF1-204ENST00000581979 CEP112Q8N8E3 955 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 RABGGTAQ92696 567 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 RPGRIP1Q96KN7 1286 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms