RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 SPATA16Q9BXB7 569 aa15.06■□□□□ 0
CSNK1D-217ENST00000581241 RNPEPQ9H4A4 650 aa15.06■□□□□ 0
CSNK1D-217ENST00000581241 SNTNA6NMZ2 147 aa15.05■□□□□ 0
CSNK1D-217ENST00000581241 NBPF26B4DH59 902 aa15.05■□□□□ 0
CSNK1D-217ENST00000581241 HMBSP08397 361 aa15.05■□□□□ 0
CSNK1D-217ENST00000581241 MMP10P09238 476 aa15.05■□□□□ 0
CSNK1D-217ENST00000581241 EPC2Q52LR7 807 aa15.05■□□□□ 0
CSNK1D-217ENST00000581241 NBPF15Q8N660 670 aa15.05■□□□□ 0
CSNK1D-217ENST00000581241 ZFRQ96KR1 1074 aaKnown RBP15.05■□□□□ 0
CSNK1D-217ENST00000581241 ADAM30Q9UKF2 790 aa15.05■□□□□ 0
CSNK1D-217ENST00000581241 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.05■□□□□ 0
CSNK1D-217ENST00000581241 TIMM44O43615 452 aa15.05■□□□□ 0
CSNK1D-217ENST00000581241 PDK2Q15119 407 aa15.05■□□□□ 0
CSNK1D-217ENST00000581241 DDX53Q86TM3 631 aaKnown RBP15.05■□□□□ 0
CSNK1D-217ENST00000581241 ATXN2LQ8WWM7 1075 aaKnown RBP15.05■□□□□ 0
CSNK1D-217ENST00000581241 TMEM79Q9BSE2 394 aa15.05■□□□□ 0
CSNK1D-217ENST00000581241 BTBD10Q9BSF8 475 aa15.05■□□□□ 0
CSNK1D-217ENST00000581241 UBE2OQ9C0C9 1292 aaKnown RBP15.05■□□□□ 0
CSNK1D-217ENST00000581241 AGPAT3Q9NRZ7 376 aa15.05■□□□□ 0
CSNK1D-217ENST00000581241 RGS5O15539 181 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 CHRM3P20309 590 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 SLC34A1Q06495 639 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 GRB10Q13322 594 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 NFYCQ13952 458 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 LPCAT2Q7L5N7 544 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 ATP8B4Q8TF62 1192 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 PACSIN1Q9BY11 444 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 CTNNAL1Q9UBT7 734 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 DAPK2Q9UIK4 370 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 TBX20Q9UMR3 447 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 DUSP10Q9Y6W6 482 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 TRAPPC3O43617 180 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 TXNP10599 105 aaKnown RBP15.05■□□□□ -0
CSNK1D-217ENST00000581241 PTPAQ15257 358 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 WWOXQ9NZC7 414 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 LSM7Q9UK45 103 aaKnown RBP15.05■□□□□ -0
CSNK1D-217ENST00000581241 SDR42E2A6NKP2 422 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 F8VZ95 297 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 TPST1O60507 370 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 MAPK1P28482 360 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 RRM2P31350 389 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 ADCK2Q7Z695 626 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 GDPD5Q8WTR4 605 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 RIT2Q99578 217 aa15.05■□□□□ -0
CSNK1D-217ENST00000581241 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.05■□□□□ -02e-12■■■■■ 34.1
CSNK1D-217ENST00000581241 TRMT6Q9UJA5 497 aaKnown RBP15.05■□□□□ -0
CSNK1D-217ENST00000581241 A0A087X0T9 212 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 FAM228BP0C875 321 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 ARHGEF7Q14155 803 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 R3HDM1Q15032 1099 aaKnown RBP15.04■□□□□ -0
CSNK1D-217ENST00000581241 BOLA3Q53S33 107 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 OTOAQ7RTW8 1153 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 KCTD14Q9BQ13 255 aaPredicted RBP15.04■□□□□ -0
CSNK1D-217ENST00000581241 MTMR2Q13614 643 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 TRIM65Q6PJ69 517 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 ZNF467Q7Z7K2 595 aaPredicted RBP15.04■□□□□ -0
CSNK1D-217ENST00000581241 LRRC6Q86X45 466 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 PPP2R3CQ969Q6 453 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 ANKEF1Q9NU02 776 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 SLC38A7Q9NVC3 462 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 HEATR9A2RTY3 570 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 SMNDC1O75940 238 aaKnown RBP eCLIP15.04■□□□□ -04e-6■■■■□ 24.8
CSNK1D-217ENST00000581241 ANGPT1Q15389 498 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 OVOS2A0A0G2JMS6 1433 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 OVOS2A0A0J9YW53 1432 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 OVOS2Q6IE36 1432 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 PIK3CDO00329 1044 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 CES2O00748 559 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 RIPK2O43353 540 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 MPOP05164 745 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 ETFBP38117 255 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 EZH2Q15910 746 aaKnown RBP15.04■□□□□ -0
CSNK1D-217ENST00000581241 HIST2H2ACQ16777 129 aaPredicted RBP15.04■□□□□ -0
CSNK1D-217ENST00000581241 HIST2H2AA3Q6FI13 130 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 SLC7A5P2Q9GIP4 190 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 JMJD4Q9H9V9 463 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 IARS2Q9NSE4 1012 aaKnown RBP15.04■□□□□ -0
CSNK1D-217ENST00000581241 PRG3Q9Y2Y8 225 aaPredicted RBP15.04■□□□□ -0
CSNK1D-217ENST00000581241 AAR2Q9Y312 384 aaKnown RBP15.04■□□□□ -0
CSNK1D-217ENST00000581241 NR5A2O00482 541 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 CYP2C8P10632 490 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 MUTP22033 750 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 MMRN1Q13201 1228 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 CYP51A1Q16850 503 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 TRIM71Q2Q1W2 868 aaKnown RBP15.04■□□□□ -0
CSNK1D-217ENST00000581241 DENND1BQ6P3S1 775 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 OR8H2Q8N162 312 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 KCTD10Q9H3F6 313 aa15.04■□□□□ -0
CSNK1D-217ENST00000581241 KPNA4O00629 521 aaPredicted RBP15.03■□□□□ -0
CSNK1D-217ENST00000581241 GALNTL6Q49A17 601 aa15.03■□□□□ -0
CSNK1D-217ENST00000581241 FAXCQ5TGI0 409 aa15.03■□□□□ -0
CSNK1D-217ENST00000581241 KHDRBS2Q5VWX1 349 aaKnown RBP15.03■□□□□ -0
CSNK1D-217ENST00000581241 FLCNQ8NFG4 579 aa15.03■□□□□ -0
CSNK1D-217ENST00000581241 SGF29Q96ES7 293 aa15.03■□□□□ -0
CSNK1D-217ENST00000581241 PRDM5Q9NQX1 630 aaPredicted RBP15.03■□□□□ -0
CSNK1D-217ENST00000581241 PIM2Q9P1W9 311 aa15.03■□□□□ -0
CSNK1D-217ENST00000581241 GRK2P25098 689 aa15.03■□□□□ -0
CSNK1D-217ENST00000581241 MZF1P28698 734 aaPredicted RBP15.03■□□□□ -0
CSNK1D-217ENST00000581241 SF3B3Q15393 1217 aaKnown RBP15.03■□□□□ -0
CSNK1D-217ENST00000581241 FAM182BQ5T319 152 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms