RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 CC2D1AQ6P1N0 951 aaPredicted RBP22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 SPEM1Q8N4L4 309 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 DCLK2Q8N568 766 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 CCDC47Q96A33 483 aaKnown RBP22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 CEP295NLQ96MC4 621 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 B3GNT5Q9BYG0 378 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 FAM126AQ9BYI3 521 aaPredicted RBP22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 TMEM30AQ9NV96 361 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 MAPK8IP1Q9UQF2 711 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 TRAF3IP3Q9Y228 551 aa22.69■■□□□ 1.22
CSNK1D-216ENST00000581108 TRIM66O15016 1216 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 CALUO43852 315 aaPredicted RBP22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 CLSTN1O94985 981 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 ZNF202O95125 648 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 ARSAP15289 507 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 HDCP19113 662 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 CCINQ13939 588 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 B3GALNT2Q8NCR0 500 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 TMC2Q8TDI7 906 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 RUBCNQ92622 972 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 CHFRQ96EP1 664 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 C8orf48Q96LL4 319 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 HINFPQ9BQA5 517 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 ZNF518BQ9C0D4 1074 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 SDCBP2Q9H190 292 aa22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 HELZP42694 1942 aaKnown RBP22.68■■□□□ 1.22
CSNK1D-216ENST00000581108 PPP2R5DQ14738 602 aa22.67■■□□□ 1.22
CSNK1D-216ENST00000581108 MTF1Q14872 753 aa22.67■■□□□ 1.22
CSNK1D-216ENST00000581108 ZNF77Q15935 545 aa22.67■■□□□ 1.22
CSNK1D-216ENST00000581108 ZACNQ401N2 412 aa22.67■■□□□ 1.22
CSNK1D-216ENST00000581108 C1orf220Q5T0J3 134 aa22.67■■□□□ 1.22
CSNK1D-216ENST00000581108 SCARA5Q6ZMJ2 495 aa22.67■■□□□ 1.22
CSNK1D-216ENST00000581108 TTLL2Q9BWV7 592 aa22.67■■□□□ 1.22
CSNK1D-216ENST00000581108 ELOVL4Q9GZR5 314 aa22.67■■□□□ 1.22
CSNK1D-216ENST00000581108 C2orf42Q9NWW7 574 aa22.67■■□□□ 1.22
CSNK1D-216ENST00000581108 TRPM5Q9NZQ8 1165 aa22.67■■□□□ 1.22
CSNK1D-216ENST00000581108 FRMD4BQ9Y2L6 1034 aa22.67■■□□□ 1.22
CSNK1D-216ENST00000581108 KIF20AO95235 890 aa22.66■■□□□ 1.22
CSNK1D-216ENST00000581108 NRLP54845 237 aa22.66■■□□□ 1.22
CSNK1D-216ENST00000581108 NOP14P78316 857 aaKnown RBP22.66■■□□□ 1.22
CSNK1D-216ENST00000581108 KCNB1Q14721 858 aa22.66■■□□□ 1.22
CSNK1D-216ENST00000581108 PDGFRLQ15198 375 aa22.66■■□□□ 1.22
CSNK1D-216ENST00000581108 SGSM1Q2NKQ1 1148 aa22.66■■□□□ 1.22
CSNK1D-216ENST00000581108 SV2AQ7L0J3 742 aa22.66■■□□□ 1.22
CSNK1D-216ENST00000581108 KIAA2013Q8IYS2 634 aa22.66■■□□□ 1.22
CSNK1D-216ENST00000581108 DUS2Q9NX74 493 aaKnown RBP22.66■■□□□ 1.22
CSNK1D-216ENST00000581108 EHD2Q9NZN4 543 aa22.66■■□□□ 1.22
CSNK1D-216ENST00000581108 MYH10P35580 1976 aa22.65■■□□□ 1.22
CSNK1D-216ENST00000581108 IKBKBO14920 756 aa22.65■■□□□ 1.22
CSNK1D-216ENST00000581108 USP4Q13107 963 aa22.65■■□□□ 1.22
CSNK1D-216ENST00000581108 TMEM196Q5HYL7 178 aa22.65■■□□□ 1.22
CSNK1D-216ENST00000581108 SH3RF2Q8TEC5 729 aa22.65■■□□□ 1.22
CSNK1D-216ENST00000581108 OSCP1Q8WVF1 389 aa22.65■■□□□ 1.22
CSNK1D-216ENST00000581108 EPC1Q9H2F5 836 aa22.65■■□□□ 1.22
CSNK1D-216ENST00000581108 FBRSL1Q9HCM7 1045 aaKnown RBP22.65■■□□□ 1.22
CSNK1D-216ENST00000581108 WNT6Q9Y6F9 365 aa22.65■■□□□ 1.22
CSNK1D-216ENST00000581108 DMXL1Q9Y485 3027 aa22.65■■□□□ 1.22
CSNK1D-216ENST00000581108 ZNF840PA6NDX5 716 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 TRDMT1O14717 391 aaKnown RBP22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 AKAP3O75969 853 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 ABL1P00519 1130 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 NR2F2P24468 414 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 VAMP7P51809 220 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 ZXDBP98169 803 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 DMWDQ09019 674 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 IFRD2Q12894 506 aaPredicted RBP22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 TAF10Q12962 218 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 SPOPLQ6IQ16 392 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 FSTL4Q6MZW2 842 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 PAQR9Q6ZVX9 377 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 ACOT1Q86TX2 421 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 SYNPOQ8N3V7 929 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 GUF1Q8N442 669 aaKnown RBP22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 KCNK16Q96T55 309 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 RNF38Q9H0F5 515 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 LINC00597Q9H2U6 94 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 ECT2Q9H8V3 914 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 ARHGAP26Q9UNA1 814 aa22.64■■□□□ 1.21
CSNK1D-216ENST00000581108 K7ESF4 209 aa22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 MAPK13O15264 365 aa22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 HOXC13P31276 330 aa22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 GJA4P35212 333 aa22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 PPP3CCP48454 512 aa22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 IFNAR2P48551 515 aa22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 GALK1P51570 392 aa22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 GRSF1Q12849 480 aaKnown RBP eCLIP22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 NFIL3Q16649 462 aa22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 NAIF1Q69YI7 327 aaPredicted RBP22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 NUP93Q8N1F7 819 aa22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 TAF4BQ92750 862 aa22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 TNIP3Q96KP6 325 aa22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 MED10Q9BTT4 135 aa22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 SMG5Q9UPR3 1016 aaKnown RBP22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 DCHS1Q96JQ0 3298 aa22.63■■□□□ 1.21
CSNK1D-216ENST00000581108 CHURC1-FNTBB4DL54 471 aa22.62■■□□□ 1.21
CSNK1D-216ENST00000581108 PAPSS2O95340 614 aaPredicted RBP22.62■■□□□ 1.21
CSNK1D-216ENST00000581108 ASS1P00966 412 aaKnown RBP22.62■■□□□ 1.21
CSNK1D-216ENST00000581108 HLA-DRAP01903 254 aa22.62■■□□□ 1.21
CSNK1D-216ENST00000581108 P4HA1P13674 534 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms