RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 WDR35Q9P2L0 1181 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SPDYE4A6NLX3 237 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 GOLGA8SH3BPF8 625 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 C2CD2LO14523 706 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 FANCGO15287 622 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 BUB1BO60566 1050 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CAPN15O75808 1086 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 GJB6O95452 261 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 ACADSBP45954 432 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 GLUD2P49448 558 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CACNA2D1P54289 1103 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 GSCP56915 257 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 KRT17Q04695 432 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SHHQ15465 462 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PSMD5Q16401 504 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 NFE2Q16621 373 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 DAAM2Q86T65 1068 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TMEM110Q86TL2 294 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PIGZQ86VD9 579 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 LRRC57Q8N9N7 239 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PIK3R5Q8WYR1 880 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 HSFY1Q96LI6 401 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 GOLPH3Q9H4A6 298 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 ABI2Q9NYB9 513 aaPredicted RBP14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 FAM53CQ9NYF3 392 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 ANAPC7Q9UJX3 599 aa14.59□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TCRBV5S1A1TA0A578 114 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CTAGE9A4FU28 777 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 GABBR2O75899 941 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 FGF18O76093 207 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 LCP1P13796 627 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CPB1P15086 417 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 RPL34P49207 117 aaKnown RBP14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 DSG1Q02413 1049 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 OR6B2Q6IFH4 312 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 RSPO2Q6UXX9 243 aaPredicted RBP14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 FAM183BPQ6ZVS7 135 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SYCE1Q8N0S2 351 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 VPS52Q8N1B4 723 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 FBXO22Q8NEZ5 403 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ZMIZ2Q8NF64 920 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 FEZF2Q8TBJ5 459 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 MCRS1Q96EZ8 462 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 BTBD6Q96KE9 485 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 KCNK16Q96T55 309 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 NAPGQ99747 312 aaPredicted RBP14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SELENOOQ9BVL4 669 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CYLDQ9NQC7 956 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 TMEM30AQ9NV96 361 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 MTRRQ9UBK8 725 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 BACE2Q9Y5Z0 518 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CEP290O15078 2479 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 NLRC5Q86WI3 1866 aa14.58□□□□□ -0.08
CDK5RAP3-219ENST00000580670 TMEM110-MUSTN1A8MSY1 372 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 FTCDO95954 541 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 URODP06132 367 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 RPL17P18621 184 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CYP2F1P24903 491 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 TAP1Q03518 808 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 MESDQ14696 234 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 DCUN1D2Q6PH85 259 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SCUBE3Q8IX30 993 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 KLHL23Q8NBE8 558 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 KCTD13Q8WZ19 329 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 FUBP3Q96I24 572 aaKnown RBP eCLIP14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PGLYRP2Q96PD5 576 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 MCEEQ96PE7 176 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 TRIM7Q9C029 511 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 LRRC4Q9HBW1 653 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CSNK1G1Q9HCP0 422 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 DMAP1Q9NPF5 467 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 STK39Q9UEW8 545 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PCDHB5Q9Y5E4 795 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CDY1Q9Y6F8 540 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PTPRDP23468 1912 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SIGLEC16A6NMB1 481 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 GRXCR1A8MXD5 290 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 MYO1FO00160 1098 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ENC1O14682 589 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PAPSS1O43252 624 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 KRT3P12035 628 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CTNNB1P35222 781 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 GRIK1P39086 918 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 RPL7AP62424 266 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ADIGQ0VDE8 80 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 GPR17Q13304 367 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 CFAP221Q4G0U5 840 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 PPP1R15BQ5SWA1 713 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 FAM102AQ5T9C2 384 aaPredicted RBP14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 C11orf63Q6NUN7 778 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 OLFML1Q6UWY5 402 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 SLFN11Q7Z7L1 901 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ATAD1Q8NBU5 361 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 UBXN6Q9BZV1 441 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 METTL5Q9NRN9 209 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 JRKLQ9Y4A0 524 aa14.57□□□□□ -0.08
CDK5RAP3-219ENST00000580670 LINC01553A4QN01 128 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 TMEM191CA6NGB0 347 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 F8VP50 259 aa14.56□□□□□ -0.08
CDK5RAP3-219ENST00000580670 ADAM12O43184 909 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms