RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 ZFYVE27Q5T4F4 411 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 LRRC38Q5VT99 294 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 RXFP2Q8WXD0 754 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 KHSRPQ92945 711 aaKnown RBP eCLIP15.59■□□□□ 0.097e-8■■□□□ 13.1
CDK5RAP3-218ENST00000580391 GDAP1L1Q96MZ0 367 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 TRIM51Q9BSJ1 452 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 MED10Q9BTT4 135 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 HEMGNQ9BXL5 484 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 FUT8Q9BYC5 575 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 RAB6CQ9H0N0 254 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 ZWILCHQ9H900 591 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 KRT82Q9NSB4 513 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 TBC1D13Q9NVG8 400 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 MTUS1Q9ULD2 1270 aa15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 MKI67P46013 3256 aaKnown RBP15.59■□□□□ 0.09
CDK5RAP3-218ENST00000580391 MYBPHLA2RUH7 354 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 XPO1O14980 1071 aaKnown RBP15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 NPR3P17342 541 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 RPL34P49207 117 aaKnown RBP15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 ZNF143P52747 638 aaPredicted RBP15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 DSC1Q08554 894 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SMC1AQ14683 1233 aaKnown RBP15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 CYP1B1Q16678 543 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 C15orf59Q2T9L4 293 aaPredicted RBP15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 MAP9Q49MG5 647 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SH3PXD2AQ5TCZ1 1133 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 MFSD7Q6UXD7 560 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 CLEC20AQ6ZU45 233 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 PIGZQ86VD9 579 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 IFT20Q8IY31 132 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 CCDC26Q8TAB7 109 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 URGCPQ8TCY9 931 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 DIS3LQ8TF46 1054 aaKnown RBP15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 AENQ8WTP8 325 aaKnown RBP15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 RSPH1Q8WYR4 309 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 MAGOHBQ96A72 148 aaKnown RBP15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 SLITRK1Q96PX8 696 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 OSBPL8Q9BZF1 889 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 PPP1R12CQ9BZL4 782 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 TMEM161AQ9NX61 479 aa15.58■□□□□ 0.09
CDK5RAP3-218ENST00000580391 BHMG1C9JSJ3 638 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 M0QZQ0 153 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PDGFRAP16234 1089 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CHRNA3P32297 505 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 GATMP50440 423 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CCL23P55773 120 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DR1Q01658 176 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 KLF1Q13351 362 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PPP2R5EQ16537 467 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CDO1Q16878 200 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TRIM60Q495X7 471 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SLC39A5Q6ZMH5 540 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 MAATS1Q7Z4T9 603 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FAM35AQ86V20 835 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 C12orf50Q8NA57 414 aaPredicted RBP15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 C1orf54Q8WWF1 131 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ATG4AQ8WYN0 398 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 RAPGEF5Q92565 580 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PCED1BQ96HM7 432 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 RBM41Q96IZ5 413 aaKnown RBP15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CFAP57Q96MR6 1250 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DUSP16Q9BY84 665 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CRISPLD2Q9H0B8 497 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 HIPK3Q9H422 1215 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DNAJB4Q9UDY4 337 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CDH9Q9ULB4 789 aa15.58■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ENPP3O14638 875 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CYP11A1P05108 521 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 MIPP30301 263 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 RABGGTBP53611 331 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PLCB3Q01970 1234 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ADIGQ0VDE8 80 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 KCNT1Q5JUK3 1230 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CCDC137Q6PK04 289 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ANKRD33Q7Z3H0 272 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 POLNQ7Z5Q5 900 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DDX42Q86XP3 938 aaKnown RBP eCLIP15.57■□□□□ 0.086e-10■□□□□ 8.4
CDK5RAP3-218ENST00000580391 COLGALT2Q8IYK4 626 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 IFT81Q8WYA0 676 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SEPT8Q92599 483 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ZNF333Q96JL9 665 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 SUSD3Q96L08 255 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 HSFY1Q96LI6 401 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PEBP4Q96S96 227 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CNPY3Q9BT09 278 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CYLDQ9NQC7 956 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 CHST7Q9NS84 486 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 TMEM30AQ9NV96 361 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PCSK1NQ9UHG2 260 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 NFU1Q9UMS0 254 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 R3HDM2Q9Y2K5 976 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 KIAA0100Q14667 2235 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 MYO16Q9Y6X6 1858 aa15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 ZNF638Q14966 1978 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-218ENST00000580391 LRRD1A4D1F6 860 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 DPYSL4O14531 572 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 FAM200BP0CF97 657 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 KRT10P13645 584 aa15.56■□□□□ 0.08
CDK5RAP3-218ENST00000580391 PCSK1P29120 753 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms