RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 CCDC33Q8N5R6 958 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ARL14EPQ8N8R7 260 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 FNBP1Q96RU3 617 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SLC22A12Q96S37 553 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PNKPQ96T60 521 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 LINC00597Q9H2U6 94 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TMLHEQ9NVH6 421 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 DDX43Q9NXZ2 648 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 GCNT4Q9P109 453 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 AGO2Q9UKV8 859 aaKnown RBP13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 CIZ1Q9ULV3 898 aaPredicted RBP13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SLC6A14Q9UN76 642 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 STYXL1Q9Y6J8 313 aa13.1□□□□□ -0.31
CDK5RAP3-216ENST00000579853 NPHP3-ACAD11A0A0J9YXS1 232 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TBCAO75347 108 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 APODP05090 189 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 CFIP05156 583 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 KRT18P05783 430 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SERPINF2P08697 491 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PTGER3P43115 390 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 MAGEA11P43364 429 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PPP3CCP48454 512 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PREPLQ4J6C6 727 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SDHAF4Q5VUM1 108 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SLC39A4Q6P5W5 647 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 SLC36A4Q6YBV0 504 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 C4orf50Q6ZRC1 276 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PDCL2Q8N4E4 241 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 LRRC52Q8N7C0 313 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 IL17RCQ8NAC3 791 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TXNDC5Q8NBS9 432 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 CACTINQ8WUQ7 758 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 CALML4Q96GE6 196 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ZSCAN31Q96LW9 406 aaPredicted RBP13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 AK8Q96MA6 479 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PLIN2Q99541 437 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 ST6GALNAC4Q9H4F1 302 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TMEM74BQ9NUR3 256 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TRPM5Q9NZQ8 1165 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 PILRBQ9UKJ0 227 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 GTF3C4Q9UKN8 822 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 KIF3AQ9Y496 699 aa13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 HELZP42694 1942 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 URB1O60287 2271 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 TNRC6BQ9UPQ9 1833 aaKnown RBP13.09□□□□□ -0.31
CDK5RAP3-216ENST00000579853 KNL1Q8NG31 2342 aa13.08□□□□□ -0.31
CDK5RAP3-216ENST00000579853 A0A0A0MRY4 1105 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 SPAARA0A1B0GVQ0 90 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 VWA3AA6NCI4 1184 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 C2orf78A6NCI8 922 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 KAT7O95251 611 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 KLF8O95600 359 aaPredicted RBP13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 ADH1CP00326 375 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 GRIA2P42262 883 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 TNFRSF4P43489 277 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 SLC14A1Q13336 389 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 MAPRE1Q15691 268 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 VSTM1Q6UX27 236 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 TMEM92Q6UXU6 159 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 NUDT18Q6ZVK8 323 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 ARMCX6Q7L4S7 300 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 TRMT11Q7Z4G4 463 aaKnown RBP13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 SCN4BQ8IWT1 228 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 ADGRG2Q8IZP9 1017 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 ALLCQ8N6M5 410 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 STKLD1Q8NE28 680 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 KCNV2Q8TDN2 545 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 RLN3Q8WXF3 142 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 SPATA17Q96L03 361 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 GDAP2Q9NXN4 497 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 L1RE1Q9UN81 338 aa13.08□□□□□ -0.32
CDK5RAP3-216ENST00000579853 ADAMTS20P59510 1910 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 GOLGA4Q13439 2230 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 ANKRD63C9JTQ0 380 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 LEFTY2O00292 366 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 CYP17A1P05093 508 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 SYPP08247 313 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 CD44P16070 742 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 ITPKAP23677 461 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 UBA7P41226 1012 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 SLC7A9P82251 487 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 RESTQ13127 1097 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 MAP7D1Q3KQU3 841 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 ZC2HC1CQ53FD0 456 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 DPH6Q7L8W6 267 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 RAB44Q7Z6P3 723 aaPredicted RBP13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 DDX42Q86XP3 938 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 PGBD3Q8N328 593 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 CHCHD4Q8N4Q1 142 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 TOP6BLQ8N6T0 577 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 LRRC15Q8TF66 581 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 HMGB4Q8WW32 186 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 POMGNT1Q8WZA1 660 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 HVCN1Q96D96 273 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 PKMYT1Q99640 499 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 GTPBP2Q9BX10 602 aaKnown RBP13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 ZHX3Q9H4I2 956 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 CAPN10Q9HC96 672 aa13.07□□□□□ -0.32
CDK5RAP3-216ENST00000579853 MBD1Q9UIS9 605 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms