RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ITIH6Q6UXX5 1313 aa16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 MICAL2O94851 1124 aa16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 RTN3O95197 1032 aaPredicted RBP16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 KRT9P35527 623 aa16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 BCAT1P54687 386 aa16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 BST2Q10589 180 aaKnown RBP16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 CBX2Q14781 532 aaPredicted RBP16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 PABPC1LQ4VXU2 614 aaKnown RBP16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 SPECC1LQ69YQ0 1117 aa16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 DENND5BQ6ZUT9 1274 aa16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 PDZD4Q76G19 769 aaPredicted RBP16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 SLC47A2Q86VL8 602 aa16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 HS6ST3Q8IZP7 471 aa16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 ZMIZ2Q8NF64 920 aa16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 ZSWIM1Q9BR11 485 aa16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 PNPLA8Q9NP80 782 aa16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 ACP6Q9NPH0 428 aa16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 TMEM30AQ9NV96 361 aa16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 UXTQ9UBK9 157 aaPredicted RBP16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 MAGED2Q9UNF1 606 aaPredicted RBP16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 MTCL1Q9Y4B5 1905 aaKnown RBP16.46■□□□□ 0.23
SLC6A4-205ENST00000579221 A0A1W2PQJ5 194 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 M0QYV0 167 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 AP5Z1O43299 807 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 SETSIPP0DME0 302 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 MYL4P12829 197 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 CYP11B1P15538 503 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 HMGA1P17096 107 aaKnown RBP16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 FSHRP23945 695 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 PDE6CP51160 858 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 NTHL1P78549 312 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 MTMR3Q13615 1198 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 SMAD2Q15796 467 aaKnown RBP16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 MEA1Q16626 185 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 TTC30AQ86WT1 665 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 FEZF2Q8TBJ5 459 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 CPLX3Q8WVH0 158 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 BAP1Q92560 729 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 NUCKS1Q9H1E3 243 aaKnown RBP16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 PDCL3Q9H2J4 239 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 CAPN11Q9UMQ6 739 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 CLUHO75153 1309 aa16.45■□□□□ 0.22
SLC6A4-205ENST00000579221 CDH23Q9H251 3354 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 TNFRSF10BO14763 440 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 XPO1O14980 1071 aaKnown RBP16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 TPM1P09493 284 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 FERP16591 822 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 YWHAQP27348 245 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 SSTR3P32745 418 aaPredicted RBP16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 EPHA5P54756 1037 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 PDE4CQ08493 712 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 TRIM14Q14142 442 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 PKDCCQ504Y2 493 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 SFMBT2Q5VUG0 894 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 ZNF677Q86XU0 584 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 VSTM4Q8IW00 320 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 TRMT2BQ96GJ1 504 aaKnown RBP16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 MYRFLQ96LU7 910 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 ASB2Q96Q27 587 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 GCNAQ96QF7 691 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 LRRC3Q9BY71 257 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 TTYH3Q9C0H2 523 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 FBXO44Q9H4M3 255 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 POMKQ9H5K3 350 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 CDH22Q9UJ99 828 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 PCDHGC3Q9UN70 934 aa16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 LUC7L2Q9Y383 392 aaKnown RBP16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 MRPS23Q9Y3D9 190 aaKnown RBP16.44■□□□□ 0.22
SLC6A4-205ENST00000579221 LRRC53A6NM62 1247 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 HHLA1C9JL84 531 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 CDC25CP30307 473 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 GPD2P43304 727 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 PPP3CCP48454 512 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 ZNF75DP51815 510 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 SLC5A3P53794 718 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 ZBED6P86452 979 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 ARID5AQ03989 594 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 DENND1BQ6P3S1 775 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 PIGZQ86VD9 579 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 TMC8Q8IU68 726 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 STKLD1Q8NE28 680 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 SLC35F5Q8WV83 523 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 SECISBP2LQ93073 1101 aaKnown RBP16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 TTLL2Q9BWV7 592 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 PHF7Q9BWX1 381 aaPredicted RBP16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 LHX5Q9H2C1 402 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 ATXN3LQ9H3M9 355 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 ZNF334Q9HCZ1 680 aaPredicted RBP16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 IL37Q9NZH6 218 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 AIPL1Q9NZN9 384 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 CEP83Q9Y592 693 aa16.43■□□□□ 0.22
SLC6A4-205ENST00000579221 F11P03951 625 aa16.42■□□□□ 0.22
SLC6A4-205ENST00000579221 GABRR2P28476 465 aa16.42■□□□□ 0.22
SLC6A4-205ENST00000579221 PLA2G4AP47712 749 aa16.42■□□□□ 0.22
SLC6A4-205ENST00000579221 KCNQ1P51787 676 aa16.42■□□□□ 0.22
SLC6A4-205ENST00000579221 IFRD2Q12894 506 aaPredicted RBP16.42■□□□□ 0.22
SLC6A4-205ENST00000579221 ASIC2Q16515 512 aa16.42■□□□□ 0.22
SLC6A4-205ENST00000579221 PRSS36Q5K4E3 855 aa16.42■□□□□ 0.22
SLC6A4-205ENST00000579221 TAF3Q5VWG9 929 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms