RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 HOXC12P31275 282 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 TECP42680 631 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 STT3AP46977 705 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 AFF1P51825 1210 aaKnown RBP5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 ADKP55263 362 aaKnown RBP5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 GFRA1P56159 465 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 KRT83P78385 493 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 Q4G0T1 1027 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 EARS2Q5JPH6 523 aaKnown RBP5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 AGAP9Q5VTM2 703 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 LRCH2Q5VUJ6 765 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 LILRA6Q6PI73 481 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 LRFN4Q6PJG9 635 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 TMEM184AQ6ZMB5 413 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 SPOCD1Q6ZMY3 1216 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 ANO5Q75V66 913 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 BMP8AQ7Z5Y6 402 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 MAP4K3Q8IVH8 894 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 KSR1Q8IVT5 923 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 NDUFAF2Q8N183 169 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 MIER2Q8N344 545 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 LSMEM1Q8N8F7 131 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 DAGLBQ8NCG7 672 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 RNF169Q8NCN4 708 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 SLC30A5Q8TAD4 765 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 CCDC12Q8WUD4 166 aaPredicted RBP5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 AUTS2Q8WXX7 1259 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 NELL1Q92832 810 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 TNPO1Q92973 898 aaKnown RBP5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 PPP2R3CQ969Q6 453 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 ARL8AQ96BM9 186 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 TBC1D20Q96BZ9 403 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 ITPKCQ96DU7 683 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 C1GALT1C1Q96EU7 318 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 RSRC1Q96IZ7 334 aaKnown RBP5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 RPGRIP1Q96KN7 1286 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 ZNF558Q96NG5 402 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 MAP7D2Q96T17 732 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 TEKT3Q9BXF9 490 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 KLF16Q9BXK1 252 aaPredicted RBP5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 UPF3BQ9BZI7 483 aaKnown RBP5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 KCNH6Q9H252 994 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 C6orf50Q9HD87 102 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 GJB4Q9NTQ9 266 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 FAM86C1Q9NVL1 165 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 WHRNQ9P202 907 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 PPARGC1AQ9UBK2 798 aaKnown RBP5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 DNAJB4Q9UDY4 337 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 CCDC39Q9UFE4 941 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 KLHL3Q9UH77 587 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 POLHQ9Y253 713 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 CRYL1Q9Y2S2 319 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 PCDHB12Q9Y5F1 795 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 PCDHA9Q9Y5H5 950 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 TICRRQ7Z2Z1 1910 aa5.3□□□□□ -1.56
GAPLINC-202ENST00000579007 RIF1Q5UIP0 2472 aaKnown RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 NUP210Q8TEM1 1887 aaPredicted RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 A0A087WV62 115 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 CYP3A7-CYP3A51PA0A087WV96 503 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 A0A087WZ62 844 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 A0A0U1RQF3 1178 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 CCDC196A0A1B0GTZ2 297 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 F8W810 466 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 MAGEB2O15479 319 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 EIF4EBP3O60516 100 aaPredicted RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 CLASP2O75122 1294 aaKnown RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 ZC3H11AO75152 810 aaKnown RBP eCLIP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 ZIC2O95409 532 aaPredicted RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 LARGE1O95461 756 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 SCG5P05408 212 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 EPCAMP16422 314 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 NFKB1P19838 968 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 CYP3A7P24462 503 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 GNA11P29992 359 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 POLR2BP30876 1174 aaKnown RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 ATICP31939 592 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 SFNP31947 248 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 ELF1P32519 619 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 HOXD12P35452 270 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 SLC11A1P49279 550 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 JAK3P52333 1124 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 CLNS1AP54105 237 aaKnown RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 YARSP54577 528 aaKnown RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 BCAR1P56945 870 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 GUCY1A3Q02108 690 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 SPIRE1Q08AE8 756 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 SIGLEC14Q08ET2 396 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 TBC1D8BQ0IIM8 1120 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 POU4F2Q12837 409 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 INPP5AQ14642 412 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 SMC1AQ14683 1233 aaKnown RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 LLGL1Q15334 1064 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 PTPN14Q15678 1187 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 INF2Q27J81 1249 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 CCDC38Q502W7 563 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 UBXN11Q5T124 520 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 IZUMO3Q5VZ72 239 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 CWF19L1Q69YN2 538 aaKnown RBP5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 KIAA1841Q6NSI8 718 aa5.29□□□□□ -1.56
GAPLINC-202ENST00000579007 ARMCX6Q7L4S7 300 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms