RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TIFAQ96CG3 184 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 PGBD4Q96DM1 585 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 EEF2KMTQ96G04 330 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 DHTKD1Q96HY7 919 aaPredicted RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 HRASLS5Q96KN8 279 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 ACAP3Q96P50 834 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 ADPGKQ9BRR6 497 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 FAM213AQ9BRX8 229 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 TMEM175Q9BSA9 504 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 MKNK1Q9BUB5 465 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 CCDC94Q9BW85 323 aaPredicted RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 APOL6Q9BWW8 343 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 MRPL9Q9BYD2 267 aaKnown RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 GPR62Q9BZJ7 368 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 ZBP1Q9H171 429 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 XYLT2Q9H1B5 865 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 MTIF3Q9H2K0 278 aaKnown RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 PCIF1Q9H4Z3 704 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 ALG2Q9H553 416 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 ASB7Q9H672 318 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 UBN1Q9NPG3 1134 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 C1GALT1Q9NS00 363 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 CHST7Q9NS84 486 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 INTS13Q9NVM9 706 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 MTMR10Q9NXD2 777 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 RBAKQ9NYW8 714 aaPredicted RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 RWDD2AQ9UIY3 292 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 EXOC7Q9UPT5 735 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 CTNND2Q9UQB3 1225 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 DERAQ9Y315 318 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 C2CD2Q9Y426 696 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 PCDHB7Q9Y5E2 793 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 PCDHGC5Q9Y5F6 944 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 UNC80Q8N2C7 3258 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 DOCK4Q8N1I0 1966 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 CHD5Q8TDI0 1954 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 NCOR1O75376 2440 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 CASTOR2A6NHX0 329 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 NT5C1B-RDH14C9J2C7 533 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 GOLGA6L22H0YM25 854 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 M0QZQ0 153 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 PSMA7O14818 248 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 PMM2O15305 246 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 SLC16A3O15427 465 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 FGF18O76093 207 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 IL18RAPO95256 599 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 VNN2O95498 520 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 LDHAP00338 332 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 CST3P01034 146 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 RB1P06400 928 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 THP07101 528 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 ADH5P11766 374 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 LAG3P18627 525 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 ERCC5P28715 1186 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 PPP1R2P41236 205 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 CYP2J2P51589 502 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 CLCNKBP51801 687 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 STX17P56962 302 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 ZNF445P59923 1031 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 ERVFC1P60507 584 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 PPP2R3AQ06190 1150 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 BFSP1Q12934 665 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 PAK1Q13153 545 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 MRPL58Q14197 206 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 BTG3Q14201 252 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 TRIP4Q15650 581 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 KYAT1Q16773 422 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 ZSCAN23Q3MJ62 389 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 ZACNQ401N2 412 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 CBWD6Q4V339 395 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 CT47A1Q5JQC4 288 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 CBWD3Q5JTY5 395 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 RTP2Q5QGT7 225 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 CBWD5Q5RIA9 395 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 KIAA0319Q5VV43 1072 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 TDRD10Q5VZ19 366 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 C9orf57Q5W0N0 161 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 LMBRD2Q68DH5 695 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 SEZ6L2Q6UXD5 910 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 RSPO2Q6UXX9 243 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 STXBP4Q6ZWJ1 553 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 HS2ST1Q7LGA3 356 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 TAS1R1Q7RTX1 841 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 ADGRD2Q7Z7M1 963 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 NT5DC4Q86YG4 428 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 WDR49Q8IV35 697 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 CD302Q8IX05 232 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 DHX40Q8IX18 779 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 SYCP3Q8IZU3 236 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 FIBCD1Q8N539 461 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 UBR7Q8N806 425 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 RNF169Q8NCN4 708 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 VN1R2Q8NFZ6 395 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 GOLGA5Q8TBA6 731 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 FEZF2Q8TBJ5 459 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 GDPD5Q8WTR4 605 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 SEMA4DQ92854 862 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 BICD1Q96G01 975 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 IGSF21Q96ID5 467 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 SAMD11Q96NU1 681 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms