RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 SMYD5Q6GMV2 418 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 GAREM2Q75VX8 874 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 ZDHHC14Q8IZN3 488 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 PLCD3Q8N3E9 789 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 ZMIZ2Q8NF64 920 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 SHKBP1Q8TBC3 707 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 TFAP2BQ92481 460 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 SHC3Q92529 594 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 FGF13Q92913 245 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 TRMT2BQ96GJ1 504 aaKnown RBP16.3■□□□□ 0.2
IFT20-208ENST00000578985 PCMTD1Q96MG8 357 aaPredicted RBP16.3■□□□□ 0.2
IFT20-208ENST00000578985 ERGIC2Q96RQ1 377 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 DUSP16Q9BY84 665 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 IL21Q9HBE4 155 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 CSNK1G1Q9HCP0 422 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 RTN4Q9NQC3 1192 aaKnown RBP16.3■□□□□ 0.2
IFT20-208ENST00000578985 UXTQ9UBK9 157 aaPredicted RBP16.3■□□□□ 0.2
IFT20-208ENST00000578985 SIK3Q9Y2K2 1263 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 FHOD1Q9Y613 1164 aa16.3■□□□□ 0.2
IFT20-208ENST00000578985 ANAPC1Q9H1A4 1944 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 A0A1W2PRU2 124 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 NRG2O14511 850 aaPredicted RBP16.29■□□□□ 0.2
IFT20-208ENST00000578985 SERPINC1P01008 464 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 CALCAP01258 141 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 LAMP2P13473 410 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 UCHL3P15374 230 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 NPR3P17342 541 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 RFX1P22670 979 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 BRD2P25440 801 aaKnown RBP16.29■□□□□ 0.2
IFT20-208ENST00000578985 CDC25CP30307 473 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 RAPGEF1Q13905 1077 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 TEAD2Q15562 447 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 GOLGA7BQ2TAP0 167 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 CLEC20AQ6ZU45 233 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 DENND5BQ6ZUT9 1274 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 NPAS3Q8IXF0 933 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 GJD3Q8N144 294 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 NUP93Q8N1F7 819 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 ANKRD52Q8NB46 1076 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 MCRS1Q96EZ8 462 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 MYRFLQ96LU7 910 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 GCNAQ96QF7 691 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 GANQ9H2C0 597 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 ATXN3LQ9H3M9 355 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 CD320Q9NPF0 282 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 FAM207AQ9NSI2 230 aaPredicted RBP16.29■□□□□ 0.2
IFT20-208ENST00000578985 EHD2Q9NZN4 543 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 EPS15L1Q9UBC2 864 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 HESX1Q9UBX0 185 aa16.29■□□□□ 0.2
IFT20-208ENST00000578985 ZFP37Q9Y6Q3 630 aaPredicted RBP16.29■□□□□ 0.2
IFT20-208ENST00000578985 NCOR1O75376 2440 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 O00370 1275 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 FOXN3O00409 490 aaPredicted RBP16.28■□□□□ 0.2
IFT20-208ENST00000578985 TEX33O43247 280 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 RTN3O95197 1032 aaPredicted RBP16.28■□□□□ 0.2
IFT20-208ENST00000578985 F11P03951 625 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 USP46P62068 366 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 FANCCQ00597 558 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 DRAP1Q14919 205 aaPredicted RBP16.28■□□□□ 0.2
IFT20-208ENST00000578985 STILQ15468 1287 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 CNGA2Q16280 664 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 ARHGAP15Q53QZ3 475 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 LCLAT1Q6UWP7 414 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 NEK11Q8NG66 645 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 NAP1L5Q96NT1 182 aaPredicted RBP16.28■□□□□ 0.2
IFT20-208ENST00000578985 ZSWIM1Q9BR11 485 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 TTLL2Q9BWV7 592 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 NAA15Q9BXJ9 866 aaKnown RBP16.28■□□□□ 0.2
IFT20-208ENST00000578985 STK33Q9BYT3 514 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 GDE1Q9NZC3 331 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 LIMD1Q9UGP4 676 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 TSPAN16Q9UKR8 245 aa16.28■□□□□ 0.2
IFT20-208ENST00000578985 A0A1B0GTH6 734 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 HHLA1C9JL84 531 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 TNFRSF10BO14763 440 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 YWHAQP27348 245 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 SLC5A3P53794 718 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 BCAT1P54687 386 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 SLC8A3P57103 927 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 POLR2FP61218 127 aaKnown RBP16.27■□□□□ 0.2
IFT20-208ENST00000578985 IFRD2Q12894 506 aaPredicted RBP16.27■□□□□ 0.2
IFT20-208ENST00000578985 TMEM150AQ86TG1 271 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 TTC30AQ86WT1 665 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 FAM71AQ8IYT1 594 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 RNF214Q8ND24 703 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 UBA3Q8TBC4 463 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 GPR88Q9GZN0 384 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 PNPLA8Q9NP80 782 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 COMMD8Q9NX08 183 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.27■□□□□ 0.2
IFT20-208ENST00000578985 DAAM1Q9Y4D1 1078 aa16.27■□□□□ 0.2
IFT20-208ENST00000578985 MYO16Q9Y6X6 1858 aa16.27■□□□□ 0.19
IFT20-208ENST00000578985 EPHB6O15197 1021 aa16.26■□□□□ 0.19
IFT20-208ENST00000578985 CYP26A1O43174 497 aa16.26■□□□□ 0.19
IFT20-208ENST00000578985 THAP12O43422 761 aa16.26■□□□□ 0.19
IFT20-208ENST00000578985 PNMA6AP0CW24 399 aaPredicted RBP16.26■□□□□ 0.19
IFT20-208ENST00000578985 GNA15P30679 374 aa16.26■□□□□ 0.19
IFT20-208ENST00000578985 CYP4F8P98187 520 aa16.26■□□□□ 0.19
IFT20-208ENST00000578985 PTK2Q05397 1052 aa16.26■□□□□ 0.19
IFT20-208ENST00000578985 PDE4CQ08493 712 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms