RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 TRPM5Q9NZQ8 1165 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 NCDNQ9UBB6 729 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 ANAPC1Q9H1A4 1944 aa16.92■□□□□ 0.3
CRLF3-203ENST00000578692 PTPRDP23468 1912 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 TRDMT1O14717 391 aaKnown RBP16.91■□□□□ 0.3
CRLF3-203ENST00000578692 CALUO43852 315 aaPredicted RBP16.91■□□□□ 0.3
CRLF3-203ENST00000578692 RHOBTB3O94955 611 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 CLSTN1O94985 981 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 VNN1O95497 513 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 PRR29P0C7W0 189 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 PPP3CCP48454 512 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 PDE6CP51160 858 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 NOP14P78316 857 aaKnown RBP16.91■□□□□ 0.3
CRLF3-203ENST00000578692 GRSF1Q12849 480 aaKnown RBP eCLIP16.91■□□□□ 0.3
CRLF3-203ENST00000578692 KCNB1Q14721 858 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 ZNF77Q15935 545 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 TMEM196Q5HYL7 178 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 CEP135Q66GS9 1140 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 B3GALNT2Q8NCR0 500 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 TMC2Q8TDI7 906 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 OSCP1Q8WVF1 389 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 TTLL2Q9BWV7 592 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 B3GNT5Q9BYG0 378 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 ELOVL4Q9GZR5 314 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 SMG5Q9UPR3 1016 aaKnown RBP16.91■□□□□ 0.3
CRLF3-203ENST00000578692 TRAF3IP3Q9Y228 551 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 FRMD4BQ9Y2L6 1034 aa16.91■□□□□ 0.3
CRLF3-203ENST00000578692 A0A1W2PQ27 194 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 A0A1W2PQ64 194 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 A0A1W2PQD8 194 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 CLDN5O00501 218 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 IKBKBO14920 756 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 PAPSS2O95340 614 aaPredicted RBP16.9■□□□□ 0.3
CRLF3-203ENST00000578692 PFKLP17858 780 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 IFNAR2P48551 515 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 GALK1P51570 392 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 CACNA2D1P54289 1103 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 DPYDQ12882 1025 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 SGSM1Q2NKQ1 1148 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 ZACNQ401N2 412 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 KRBA2Q6ZNG9 492 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 SH3RF2Q8TEC5 729 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 SECISBP2LQ93073 1101 aaKnown RBP16.9■□□□□ 0.3
CRLF3-203ENST00000578692 ELMO3Q96BJ8 720 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 CHFRQ96EP1 664 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 ZNF518BQ9C0D4 1074 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 SMYD3Q9H7B4 428 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 ECT2Q9H8V3 914 aa16.9■□□□□ 0.3
CRLF3-203ENST00000578692 ZNF840PA6NDX5 716 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 K7ESF4 209 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 ZNF202O95125 648 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 TCF3P15923 654 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 GJA4P35212 333 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 RAP1GAPP47736 663 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 USP4Q13107 963 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 FSTL4Q6MZW2 842 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 SV2AQ7L0J3 742 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 NUP93Q8N1F7 819 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 CPA6Q8N4T0 437 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 TNIP3Q96KP6 325 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 GOLPH3LQ9H4A5 285 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 FBRSL1Q9HCM7 1045 aaKnown RBP16.89■□□□□ 0.3
CRLF3-203ENST00000578692 TMEM30AQ9NV96 361 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 C2orf42Q9NWW7 574 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 ARHGAP26Q9UNA1 814 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 MAPK8IP1Q9UQF2 711 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 WNT6Q9Y6F9 365 aa16.89■□□□□ 0.3
CRLF3-203ENST00000578692 CHURC1-FNTBB4DL54 471 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 MAPK13O15264 365 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 ABL1P00519 1130 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 P4HA1P13674 534 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 FNTBP49356 437 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 DMWDQ09019 674 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 TAF10Q12962 218 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 NR1H3Q13133 447 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 EML3Q32P44 896 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 SCARA5Q6ZMJ2 495 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 GPR161Q8N6U8 529 aaKnown RBP16.89■□□□□ 0.29
CRLF3-203ENST00000578692 TAF4BQ92750 862 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 ATP2A3Q93084 1043 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 EXOC4Q96A65 974 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 SLITRK1Q96PX8 696 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 KCNK16Q96T55 309 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 P2RY13Q9BPV8 354 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 MED10Q9BTT4 135 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 RNF38Q9H0F5 515 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 SDCBP2Q9H190 292 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 LINC00597Q9H2U6 94 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 GDPD2Q9HCC8 539 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 RAB23Q9ULC3 237 aa16.89■□□□□ 0.29
CRLF3-203ENST00000578692 HRO43593 1189 aa16.88■□□□□ 0.29
CRLF3-203ENST00000578692 ATG13O75143 517 aa16.88■□□□□ 0.29
CRLF3-203ENST00000578692 RTN3O95197 1032 aaPredicted RBP16.88■□□□□ 0.29
CRLF3-203ENST00000578692 DRD1P21728 446 aa16.88■□□□□ 0.29
CRLF3-203ENST00000578692 NR2F2P24468 414 aa16.88■□□□□ 0.29
CRLF3-203ENST00000578692 YWHAQP27348 245 aa16.88■□□□□ 0.29
CRLF3-203ENST00000578692 CNR2P34972 360 aa16.88■□□□□ 0.29
CRLF3-203ENST00000578692 VAMP7P51809 220 aa16.88■□□□□ 0.29
CRLF3-203ENST00000578692 SLC7A9P82251 487 aa16.88■□□□□ 0.29
CRLF3-203ENST00000578692 ZXDBP98169 803 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms