RNA–Protein interactions for RNA: ENST00000575261.5

TVP23B-208, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 3

Gene TVP23B, Length 697 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-208ENST00000575261 DMC1Q14565 340 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 STK38Q15208 465 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 PLK5Q496M5 336 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 LIMS2Q7Z4I7 341 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 GLIS3Q8NEA6 775 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 EZH1Q92800 747 aaPredicted RBP11.16□□□□□ -0.62
TVP23B-208ENST00000575261 PCED1BQ96HM7 432 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 INTS4Q96HW7 963 aaKnown RBP11.16□□□□□ -0.62
TVP23B-208ENST00000575261 MMS19Q96T76 1030 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 TRIM9Q9C026 710 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 CUEDC2Q9H467 287 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 ZSCAN16Q9H4T2 348 aaPredicted RBP11.16□□□□□ -0.62
TVP23B-208ENST00000575261 CRTAC1Q9NQ79 661 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 VPS45Q9NRW7 570 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 POLR3BQ9NW08 1133 aaPredicted RBP11.16□□□□□ -0.62
TVP23B-208ENST00000575261 TRPM5Q9NZQ8 1165 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 EBF1Q9UH73 591 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 MTMR6Q9Y217 621 aa11.16□□□□□ -0.62
TVP23B-208ENST00000575261 UBE4BO95155 1302 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 RHOBTB1O94844 696 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 DLATP10515 647 aaKnown RBP11.15□□□□□ -0.62
TVP23B-208ENST00000575261 PPP3CCP48454 512 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 NOP14P78316 857 aaKnown RBP11.15□□□□□ -0.62
TVP23B-208ENST00000575261 ASIC1P78348 528 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 AMPD3Q01432 767 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 SNRNP35Q16560 246 aaKnown RBP11.15□□□□□ -0.62
TVP23B-208ENST00000575261 STPG1Q5TH74 334 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 C11orf74Q86VG3 221 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 KIAA1958Q8N8K9 716 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 TSTD1Q8NFU3 115 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 MYCBPAPQ8TBZ2 947 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 HPS3Q969F9 1004 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 FNBP1Q96RU3 617 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 TTLL2Q9BWV7 592 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 RXFP3Q9NSD7 469 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 KBTBD4Q9NVX7 518 aa11.15□□□□□ -0.62
TVP23B-208ENST00000575261 WDFY3Q8IZQ1 3526 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 F8VP50 259 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 LEFTY2O00292 366 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 STX6O43752 255 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 PPP6R2O75170 966 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 TACC1O75410 805 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 PDGFRBP09619 1106 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 TNNI1P19237 187 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 DGKEP52429 567 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 USP46P62068 366 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 TNNC1P63316 161 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 SLC7A9P82251 487 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 E2F4Q16254 413 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 MDH1BQ5I0G3 518 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 FAM26FQ5R3K3 315 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 HS2ST1Q7LGA3 356 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 TRAPPC11Q7Z392 1133 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 LINC00301Q8NCQ3 95 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 SLITRK1Q96PX8 696 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 CGRRF1Q99675 332 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 MRPL45Q9BRJ2 306 aaKnown RBP11.14□□□□□ -0.63
TVP23B-208ENST00000575261 ELOVL4Q9GZR5 314 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 DUSP15Q9H1R2 295 aaPredicted RBP11.14□□□□□ -0.63
TVP23B-208ENST00000575261 SNX25Q9H3E2 840 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 SMOC1Q9H4F8 434 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 AGPAT3Q9NRZ7 376 aa11.14□□□□□ -0.63
TVP23B-208ENST00000575261 ZNF840PA6NDX5 716 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 SLC9A3R1O14745 358 aaPredicted RBP11.13□□□□□ -0.63
TVP23B-208ENST00000575261 TM4SF5O14894 197 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 DCLK1O15075 740 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 SPTLC2O15270 562 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 OLFM2O95897 454 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 CYP17A1P05093 508 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 GBP1P32455 592 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 HOXD13P35453 343 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 GNL1P36915 607 aaPredicted RBP11.13□□□□□ -0.63
TVP23B-208ENST00000575261 OPRD1P41143 372 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 SEC13P55735 322 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 SNRPFP62306 86 aaKnown RBP11.13□□□□□ -0.63
TVP23B-208ENST00000575261 ZXDBP98169 803 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 CREB5Q02930 508 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 CYP24A1Q07973 514 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 PSMD6Q15008 389 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 ST3GAL2Q16842 350 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 USP39Q53GS9 565 aaKnown RBP11.13□□□□□ -0.63
TVP23B-208ENST00000575261 RNF43Q68DV7 783 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 TCEAL6Q6IPX3 200 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 CNNM4Q6P4Q7 775 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 EPM2AIP1Q7L775 607 aaPredicted RBP11.13□□□□□ -0.63
TVP23B-208ENST00000575261 FILIP1Q7Z7B0 1213 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 IQUBQ8NA54 791 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 XXYLT1Q8NBI6 393 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 RDH13Q8NBN7 331 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 OR6B3Q8NGW1 331 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 ZNF507Q8TCN5 953 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 USP33Q8TEY7 942 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 TCEAL3Q969E4 200 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 DHX58Q96C10 678 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 CHAMP1Q96JM3 812 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 CNOT6LQ96LI5 555 aaKnown RBP11.13□□□□□ -0.63
TVP23B-208ENST00000575261 C8orf48Q96LL4 319 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 EDEM2Q9BV94 578 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 LINC00597Q9H2U6 94 aa11.13□□□□□ -0.63
TVP23B-208ENST00000575261 MAGEF1Q9HAY2 307 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms