RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PTGER3P43115 390 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 RPL6Q02878 288 aaKnown RBP12.8□□□□□ -0.36
CTNS-208ENST00000574218 RESTQ13127 1097 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 IL17AQ16552 155 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 ZC2HC1CQ53FD0 456 aaPredicted RBP12.8□□□□□ -0.36
CTNS-208ENST00000574218 C19orf48Q6RUI8 117 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 TMEM92Q6UXU6 159 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 SLC36A4Q6YBV0 504 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 C4orf50Q6ZRC1 276 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 PIP4P1Q86T03 277 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 PDCL2Q8N4E4 241 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 PIP4P2Q8N4L2 257 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 CHCHD4Q8N4Q1 142 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 SPRYD3Q8NCJ5 442 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 CACTINQ8WUQ7 758 aaKnown RBP12.8□□□□□ -0.36
CTNS-208ENST00000574218 POMGNT1Q8WZA1 660 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 LINC00597Q9H2U6 94 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 EHD2Q9NZN4 543 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 TRPM5Q9NZQ8 1165 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 GTF3C4Q9UKN8 822 aa12.8□□□□□ -0.36
CTNS-208ENST00000574218 TCRBV21S2A2A0A5A6 115 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 VWA3AA6NCI4 1184 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.79□□□□□ -0.36
CTNS-208ENST00000574218 LEFTY2O00292 366 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 KAT7O95251 611 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 ADH1CP00326 375 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 PFKLP17858 780 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 ITPKAP23677 461 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 ANXA13P27216 316 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 POLR2BP30876 1174 aaKnown RBP12.79□□□□□ -0.36
CTNS-208ENST00000574218 TOB1P50616 345 aaPredicted RBP12.79□□□□□ -0.36
CTNS-208ENST00000574218 TFAMQ00059 246 aaKnown RBP12.79□□□□□ -0.36
CTNS-208ENST00000574218 POU5F1Q01860 360 aaKnown RBP12.79□□□□□ -0.36
CTNS-208ENST00000574218 ST3GAL1Q11201 340 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 PREPLQ4J6C6 727 aaPredicted RBP12.79□□□□□ -0.36
CTNS-208ENST00000574218 NUDT18Q6ZVK8 323 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 TRMT11Q7Z4G4 463 aaKnown RBP12.79□□□□□ -0.36
CTNS-208ENST00000574218 FILIP1Q7Z7B0 1213 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 PDZD3Q86UT5 571 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 MINDY1Q8N5J2 469 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 FUBP3Q96I24 572 aaKnown RBP eCLIP12.79□□□□□ -0.36
CTNS-208ENST00000574218 FNBP1Q96RU3 617 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 CCDC86Q9H6F5 360 aaKnown RBP12.79□□□□□ -0.36
CTNS-208ENST00000574218 ARHGEF4Q9NR80 690 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.79□□□□□ -0.36
CTNS-208ENST00000574218 TMEM74BQ9NUR3 256 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 GCNT4Q9P109 453 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 MBD1Q9UIS9 605 aaPredicted RBP12.79□□□□□ -0.36
CTNS-208ENST00000574218 PILRBQ9UKJ0 227 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 AGAP1Q9UPQ3 857 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 PCDH15Q96QU1 1955 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 ACACAQ13085 2346 aa12.79□□□□□ -0.36
CTNS-208ENST00000574218 GCN1Q92616 2671 aaKnown RBP12.78□□□□□ -0.36
CTNS-208ENST00000574218 MYH10P35580 1976 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 ITPR1Q14643 2758 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 SGK1O00141 431 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 SLC26A4O43511 780 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 ABL1P00519 1130 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 CYP17A1P05093 508 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 ITGB3P05106 788 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 SERPINF2P08697 491 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 KRT19P08727 400 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 EIF2DP41214 584 aaKnown RBP12.78□□□□□ -0.36
CTNS-208ENST00000574218 UBA7P41226 1012 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 LHX1P48742 406 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 ATP2C1P98194 919 aaPredicted RBP12.78□□□□□ -0.36
CTNS-208ENST00000574218 GTF2BQ00403 316 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 KDSRQ06136 332 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 SCAPQ12770 1279 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 POSTNQ15063 836 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 MAP7D1Q3KQU3 841 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 CFAP221Q4G0U5 840 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 TMEM119Q4V9L6 283 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 RILPL1Q5EBL4 403 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 ARSHQ5FYA8 562 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 MCTP1Q6DN14 999 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 SLC39A4Q6P5W5 647 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 IL17RCQ8NAC3 791 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 MAGEC2Q9UBF1 373 aaPredicted RBP12.78□□□□□ -0.36
CTNS-208ENST00000574218 L1RE1Q9UN81 338 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 KIF3AQ9Y496 699 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 PTPRBP23467 1997 aa12.78□□□□□ -0.36
CTNS-208ENST00000574218 FAM221BA6H8Z2 402 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 ANKRD63C9JTQ0 380 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 ADH5P11766 374 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 HNRNPLP14866 589 aaKnown RBP eCLIP12.77□□□□□ -0.37
CTNS-208ENST00000574218 GRIK1P39086 918 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 GRIA2P42262 883 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 MAGEA11P43364 429 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 TNFRSF4P43489 277 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 DHCR24Q15392 516 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 COL28A1Q2UY09 1125 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 PEAR1Q5VY43 1037 aaPredicted RBP12.77□□□□□ -0.37
CTNS-208ENST00000574218 BTBD8Q5XKL5 378 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 DENND5BQ6ZUT9 1274 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 RAB44Q7Z6P3 723 aaPredicted RBP12.77□□□□□ -0.37
CTNS-208ENST00000574218 DDX42Q86XP3 938 aaKnown RBP eCLIP12.77□□□□□ -0.37
CTNS-208ENST00000574218 ADGRF2Q8IZF7 708 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 RGL4Q8IZJ4 473 aa12.77□□□□□ -0.37
CTNS-208ENST00000574218 FRMD1Q8N878 549 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms